Structure of cyclophilin from Leishmania donovani bound to cyclosporin at 2.6 A resolution: correlation between structure and thermodynamic data
- PMID: 19923714
- DOI: 10.1107/S0907444909034234
Structure of cyclophilin from Leishmania donovani bound to cyclosporin at 2.6 A resolution: correlation between structure and thermodynamic data
Abstract
Drug development against Leishmania donovani, the pathogen that causes visceral leishmaniasis in humans, is currently an active area of research given the widespread prevalence of the disease and the emergence of resistant strains. The immunosuppressive drug cyclosporin is known to have antiparasitic activity against a variety of pathogens. The receptor for cyclosporin is the protein cyclophilin, which is a ubiquitous peptidylprolyl isomerase. The crystal structure of cyclophilin from L. donovani complexed with cyclosporin has been solved at 2.6 A resolution. The thermodynamic parameters of the interaction have been determined using spectroscopic and calorimetric techniques. A detailed effort has been made to predict the thermodynamic parameters of binding from computations based on the three-dimensional crystal structure. These results were in good agreement with the corresponding experimental values. Furthermore, the structural and biophysical results have been discussed in the context of leishmanial drug resistance and could also set the stage for the design of potent non-immunosuppressive antileishmanials.
Similar articles
-
Structure of cyclophilin from Leishmania donovani at 1.97 A resolution.Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Feb 1;63(Pt 2):60-4. doi: 10.1107/S1744309106056351. Epub 2007 Jan 17. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007. PMID: 17277440 Free PMC article.
-
The three-dimensional structure of a Plasmodium falciparum cyclophilin in complex with the potent anti-malarial cyclosporin A.J Mol Biol. 2000 Apr 21;298(1):123-33. doi: 10.1006/jmbi.2000.3633. J Mol Biol. 2000. PMID: 10756109
-
The thermodynamic influence of trapped water molecules on a protein-ligand interaction.Angew Chem Int Ed Engl. 2009;48(28):5207-10. doi: 10.1002/anie.200900481. Angew Chem Int Ed Engl. 2009. PMID: 19499554
-
Cyclosporin A as a model antigen: immunochemical and structural studies.J Mol Recognit. 2002 Sep-Oct;15(5):277-85. doi: 10.1002/jmr.588. J Mol Recognit. 2002. PMID: 12447904 Review.
-
Cyclosporins. Structure-activity relationships.Ann N Y Acad Sci. 1993 Nov 30;696:47-53. Ann N Y Acad Sci. 1993. PMID: 8109856 Review.
Cited by
-
In-silico Leishmania target selectivity of antiparasitic terpenoids.Molecules. 2013 Jul 3;18(7):7761-847. doi: 10.3390/molecules18077761. Molecules. 2013. PMID: 23823876 Free PMC article.
-
EnCPdock: a web-interface for direct conjoint comparative analyses of complementarity and binding energetics in inter-protein associations.J Mol Model. 2023 Jul 10;29(8):239. doi: 10.1007/s00894-023-05626-0. J Mol Model. 2023. PMID: 37423912
-
Investigating the Release of a Hydrophobic Peptide from Matrices of Biodegradable Polymers: An Integrated Method Approach.Polymer (Guildf). 2013 Jul 8;54(15):3806-3820. doi: 10.1016/j.polymer.2013.05.038. Polymer (Guildf). 2013. PMID: 24039300 Free PMC article.
-
A staphylococcal cyclophilin carries a single domain and unfolds via the formation of an intermediate that preserves cyclosporin A binding activity.PLoS One. 2019 Mar 29;14(3):e0210771. doi: 10.1371/journal.pone.0210771. eCollection 2019. PLoS One. 2019. PMID: 30925148 Free PMC article.
-
A Distributional Model of Bound Ligand Conformational Strain: From Small Molecules up to Large Peptidic Macrocycles.J Med Chem. 2023 Feb 9;66(3):1955-1971. doi: 10.1021/acs.jmedchem.2c01744. Epub 2023 Jan 26. J Med Chem. 2023. PMID: 36701387 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Molecular Biology Databases