Small-sized human immunodeficiency virus type-1 protease inhibitors containing allophenylnorstatine to explore the S2' pocket
- PMID: 19954246
- DOI: 10.1021/jm9005115
Small-sized human immunodeficiency virus type-1 protease inhibitors containing allophenylnorstatine to explore the S2' pocket
Abstract
A series of HIV protease inhibitor based on the allophenylnorstatine structure with various P(2)' moieties were synthesized. Among these analogues, we discovered that a small allyl group would maintain potent enzyme inhibitory activity compared to the o-methylbenzyl moiety in clinical candidate 1 (KNI-764, also known as JE-2147, AG-1776, or SM-319777). Introduction of an anilinic amino group to 2 (KNI-727) improved water-solubility and anti-HIV-1 activity. X-ray crystallographic analysis of 13k (KNI-1689) with a beta-methallyl group at P(2)' position revealed hydrophobic interactions with Ala28, Ile84, and Ile50' similar to that of 1. The presence of an additional methyl group on the allyl group in compound 13k significantly increased anti-HIV activity over 1 while providing a rational drug design for structural minimization and improving membrane permeability.
Similar articles
-
Structure-activity relationships of novel HIV-1 protease inhibitors containing the 3-amino-2-chlorobenzoyl-allophenylnorstatine structure.Bioorg Med Chem. 2008 Feb 1;16(3):1299-308. doi: 10.1016/j.bmc.2007.10.062. Epub 2007 Oct 23. Bioorg Med Chem. 2008. PMID: 17981045
-
Combination of non-natural D-amino acid derivatives and allophenylnorstatine-dimethylthioproline scaffold in HIV protease inhibitors have high efficacy in mutant HIV.J Med Chem. 2008 May 22;51(10):2992-3004. doi: 10.1021/jm701555p. Epub 2008 Apr 22. J Med Chem. 2008. PMID: 18426195
-
Synthesis and antiviral property of allophenylnorstatine-based HIV protease inhibitors incorporating D-cysteine derivatives as P2/P3 moieties.Bioorg Med Chem Lett. 2007 Aug 1;17(15):4213-7. doi: 10.1016/j.bmcl.2007.05.039. Epub 2007 May 17. Bioorg Med Chem Lett. 2007. PMID: 17537628
-
Small dipeptide-based HIV protease inhibitors containing the hydroxymethylcarbonyl isostere as an ideal transition-state mimic.Biopolymers. 1999;51(1):59-68. doi: 10.1002/(SICI)1097-0282(1999)51:1<59::AID-BIP7>3.0.CO;2-3. Biopolymers. 1999. PMID: 10380353 Review.
-
Adaptive inhibitors of the HIV-1 protease.Prog Biophys Mol Biol. 2005 Jun;88(2):193-208. doi: 10.1016/j.pbiomolbio.2004.07.005. Prog Biophys Mol Biol. 2005. PMID: 15572155 Review.
Cited by
-
Multiple Target Drug Design Using LigBuilder 3.Methods Mol Biol. 2021;2266:279-298. doi: 10.1007/978-1-0716-1209-5_16. Methods Mol Biol. 2021. PMID: 33759133
-
LigBuilder V3: A Multi-Target de novo Drug Design Approach.Front Chem. 2020 Feb 28;8:142. doi: 10.3389/fchem.2020.00142. eCollection 2020. Front Chem. 2020. PMID: 32181242 Free PMC article.
-
Related Endogenous Retrovirus-K Elements Harbor Distinct Protease Active Site Motifs.Front Microbiol. 2018 Jul 18;9:1577. doi: 10.3389/fmicb.2018.01577. eCollection 2018. Front Microbiol. 2018. PMID: 30072963 Free PMC article.
-
Tetrahydrofuran, tetrahydropyran, triazoles and related heterocyclic derivatives as HIV protease inhibitors.Future Med Chem. 2011 Jul;3(9):1181-97. doi: 10.4155/fmc.11.68. Future Med Chem. 2011. PMID: 21806380 Free PMC article. Review.
-
Conformational Space Profiling Enhances Generic Molecular Representation for AI-Powered Ligand-Based Drug Discovery.Adv Sci (Weinh). 2024 Oct;11(40):e2403998. doi: 10.1002/advs.202403998. Epub 2024 Aug 29. Adv Sci (Weinh). 2024. PMID: 39206753 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Chemical Information