Conformational disorder
- PMID: 20221927
- DOI: 10.1007/978-1-60327-241-4_18
Conformational disorder
Abstract
In recent years it was shown that a large number of proteins are either fully or partially disordered. Intrinsically disordered proteins are ubiquitary proteins that fulfill essential biological functions while lacking a stable 3D structure. Despite the large abundance of disorder, disordered regions are still poorly detected. The identification of disordered regions facilitates the functional annotation of proteins and is instrumental in delineating boundaries of protein domains amenable to crystallization. This chapter focuses on the methods currently employed for predicting disorder and identifying regions involved in induced folding.
Similar articles
-
Predicting Conformational Disorder.Methods Mol Biol. 2016;1415:265-99. doi: 10.1007/978-1-4939-3572-7_14. Methods Mol Biol. 2016. PMID: 27115638
-
Prediction of protein disorder.Methods Mol Biol. 2008;426:103-15. doi: 10.1007/978-1-60327-058-8_6. Methods Mol Biol. 2008. PMID: 18542859
-
Analysis and prediction of protein quaternary structure.Methods Mol Biol. 2010;609:349-64. doi: 10.1007/978-1-60327-241-4_20. Methods Mol Biol. 2010. PMID: 20221929
-
A practical overview of protein disorder prediction methods.Proteins. 2006 Oct 1;65(1):1-14. doi: 10.1002/prot.21075. Proteins. 2006. PMID: 16856179 Review.
-
Bioinformatical approaches to characterize intrinsically disordered/unstructured proteins.Brief Bioinform. 2010 Mar;11(2):225-43. doi: 10.1093/bib/bbp061. Epub 2009 Dec 10. Brief Bioinform. 2010. PMID: 20007729 Review.
Cited by
-
Grape ASR-Silencing Sways Nuclear Proteome, Histone Marks and Interplay of Intrinsically Disordered Proteins.Int J Mol Sci. 2022 Jan 28;23(3):1537. doi: 10.3390/ijms23031537. Int J Mol Sci. 2022. PMID: 35163458 Free PMC article.
-
Structural disorder and induced folding within two cereal, ABA stress and ripening (ASR) proteins.Sci Rep. 2017 Nov 14;7(1):15544. doi: 10.1038/s41598-017-15299-4. Sci Rep. 2017. PMID: 29138428 Free PMC article.
-
Predicting Protein Conformational Disorder and Disordered Binding Sites.Methods Mol Biol. 2022;2449:95-147. doi: 10.1007/978-1-0716-2095-3_4. Methods Mol Biol. 2022. PMID: 35507260
-
How disordered is my protein and what is its disorder for? A guide through the "dark side" of the protein universe.Intrinsically Disord Proteins. 2016 Dec 21;4(1):e1259708. doi: 10.1080/21690707.2016.1259708. eCollection 2016. Intrinsically Disord Proteins. 2016. PMID: 28232901 Free PMC article.
-
Brain expressed and X-linked (Bex) proteins are intrinsically disordered proteins (IDPs) and form new signaling hubs.PLoS One. 2015 Jan 22;10(1):e0117206. doi: 10.1371/journal.pone.0117206. eCollection 2015. PLoS One. 2015. PMID: 25612294 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources