Isolation of simple-sequence loci for use in polymerase chain reaction-based DNA fingerprinting
- PMID: 2040259
- DOI: 10.1002/elps.1150120205
Isolation of simple-sequence loci for use in polymerase chain reaction-based DNA fingerprinting
Abstract
Simple sequences are short regions of tandem repetitions of mono-, di-, tri-, or tetranucleotide motifs and occur as repetitive elements in all eukaryotic genomes. These regions tend to be hypervariable in length and can therefore be exploited for DNA fingerprinting purposes, using the polymerase chain reaction with primers flanking such regions. We describe how suitable simple-sequence loci can be isolated from any given eukaryotic DNA. We show the DNA sequences for a number of variants of such loci and discuss the current results on their usefulness for DNA fingerprinting.
Similar articles
-
Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification.Genomics. 1994 Mar 15;20(2):176-83. doi: 10.1006/geno.1994.1151. Genomics. 1994. PMID: 8020964
-
Oligonucleotide fingerprinting with (CAC)5: nonradioactive in-gel hybridization and isolation of individual hypervariable loci.Electrophoresis. 1991 Feb-Mar;12(2-3):141-6. doi: 10.1002/elps.1150120208. Electrophoresis. 1991. PMID: 2040261
-
Conservation of polymorphic simple sequence loci in cetacean species.Nature. 1991 Nov 7;354(6348):63-5. doi: 10.1038/354063a0. Nature. 1991. PMID: 1944571
-
DNA fingerprinting and forensic medicine.Southeast Asian J Trop Med Public Health. 1995;26 Suppl 1:296-300. Southeast Asian J Trop Med Public Health. 1995. PMID: 8629128 Review.
-
DNA fingerprinting of eukaryote genomes by synthetic oligodeoxyribonucleotide probes.Indian J Biochem Biophys. 1991 Feb;28(1):1-9. Indian J Biochem Biophys. 1991. PMID: 2055594 Review.
Cited by
-
A modified enrichment method to construct microsatellite library from plateau pika genome (Ochotona curzoniae).Genomics Proteomics Bioinformatics. 2010 Mar;8(1):72-6. doi: 10.1016/S1672-0229(10)60007-1. Genomics Proteomics Bioinformatics. 2010. PMID: 20451163 Free PMC article.
-
Dense single nucleotide polymorphism testing revolutionizes scope and degree of certainty for source attribution in forensic investigations.Croat Med J. 2024 Jun 13;65(3):249-260. doi: 10.3325/cmj.2024.65.249. Croat Med J. 2024. PMID: 38868971 Free PMC article. Review.
-
Long repeats in a huge genome: microsatellite loci in the grasshopper Chorthippus biguttulus.J Mol Evol. 2006 Feb;62(2):158-67. doi: 10.1007/s00239-005-0022-6. Epub 2006 Feb 10. J Mol Evol. 2006. PMID: 16474983
-
First Report on Development of Genome-Wide Microsatellite Markers for Stock (Matthiola incana L.).Plants (Basel). 2023 Feb 7;12(4):748. doi: 10.3390/plants12040748. Plants (Basel). 2023. PMID: 36840095 Free PMC article.
-
Fully integrated, fully automated generation of short tandem repeat profiles.Investig Genet. 2013 Aug 6;4(1):16. doi: 10.1186/2041-2223-4-16. Investig Genet. 2013. PMID: 23915594 Free PMC article.
MeSH terms
Substances
LinkOut - more resources
Full Text Sources