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. 2010 Sep 15;56(4):644-7.
doi: 10.1016/j.toxicon.2010.05.013.

ATDB 2.0: A database integrated toxin-ion channel interaction data

Quanze He  1 , Wenjun Han, Quanyuan He, Linju Huo, Jingjing Zhang, Yong Lin, Ping Chen, Songping Liang
Affiliations

ATDB 2.0: A database integrated toxin-ion channel interaction data

Quanze He et al. Toxicon. .

Abstract

We have developed an updated version of the Animal Toxin Database (ATDB 2.0) that provides a new bioinformatics resource for analyzing toxin-channel (T-C) interactions. Data on more than 54,000 T-C interactions, including 9193 high-confidence interactions, has been extracted, formatted and mapped to toxin and ion channel databases. The interaction data can be accessed easily through a new network browser on the website at http://protchem.hunnu.edu.cn/toxin. This resource may be useful for sequence pattern recognition and prediction of the function of new toxins.

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