Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2010 Dec;192(23):6319-20.
doi: 10.1128/JB.00972-10. Epub 2010 Sep 24.

Resequencing the Mycobacterium avium subsp. paratuberculosis K10 genome: improved annotation and revised genome sequence

Affiliations

Resequencing the Mycobacterium avium subsp. paratuberculosis K10 genome: improved annotation and revised genome sequence

James W Wynne et al. J Bacteriol. 2010 Dec.

Abstract

We report the resequencing and revised annotation of the Mycobacterium avium subsp. paratuberculosis K10 genome. A total of 90 single-nucleotide errors and a 51-bp indel in the original K10 genome were corrected, and the whole genome annotation was revised. Correction of these sequencing errors resulted in 28 frameshift alterations. The amended genome sequence is accessible via the supplemental section of study SRR060191 in the NCBI Sequence Read Archive and will serve as a valuable reference genome for future studies.

PubMed Disclaimer

References

    1. Li, L. L., J. P. Bannantine, Q. Zhang, A. Amonsin, B. J. May, D. Alt, N. Banerji, S. Kanjilal, and V. Kapur. 2005. The complete genome sequence of Mycobacterium avium subspecies paratuberculosis. Proc. Natl. Acad. Sci. U. S. A. 102:12344-12349. - PMC - PubMed
    1. Rumble, S. M., P. Lacroute, A. V. Dalca, M. Fiume, A. Sidow, and M. Brudno. 2009. SHRiMP: accurate mapping of short color-space reads. PLoS Comput. Biol. 5:e1000386. - PMC - PubMed
    1. Wu, C. W., T. M. Schramm, S. G. Zhou, D. C. Schwartz, and A. M. Talaat. 2009. Optical mapping of the Mycobacterium avium subspecies paratuberculosis genome. BMC Genomics 10:25. - PMC - PubMed

Publication types

MeSH terms