Networks in plant epidemiology: from genes to landscapes, countries, and continents
- PMID: 21062110
- DOI: 10.1094/PHYTO-07-10-0192
Networks in plant epidemiology: from genes to landscapes, countries, and continents
Abstract
There is increasing use of networks in ecology and epidemiology, but still relatively little application in phytopathology. Networks are sets of elements (nodes) connected in various ways by links (edges). Network analysis aims to understand system dynamics and outcomes in relation to network characteristics. Many existing natural, social, and technological networks have been shown to have small-world (local connectivity with short-cuts) and scale-free (presence of super-connected nodes) properties. In this review, we discuss how network concepts can be applied in plant pathology from the molecular to the landscape and global level. Wherever disease spread occurs not just because of passive/natural dispersion but also due to artificial movements, it makes sense to superimpose realistic models of the trade in plants on spatially explicit models of epidemic development. We provide an example of an emerging pathosystem (Phytophthora ramorum) where a theoretical network approach has proven particularly fruitful in analyzing the spread of disease in the UK plant trade. These studies can help in assessing the future threat posed by similar emerging pathogens. Networks have much potential in plant epidemiology and should become part of the standard curriculum.
Similar articles
-
Disease spread in small-size directed networks: epidemic threshold, correlation between links to and from nodes, and clustering.J Theor Biol. 2009 Oct 7;260(3):402-11. doi: 10.1016/j.jtbi.2009.06.015. Epub 2009 Jun 21. J Theor Biol. 2009. PMID: 19545575
-
Invasion of Phytophthora infestans at the landscape level: how do spatial scale and weather modulate the consequences of spatial heterogeneity in host resistance?Phytopathology. 2010 Nov;100(11):1146-61. doi: 10.1094/PHYTO-06-09-0148. Phytopathology. 2010. PMID: 20932163
-
Landscape epidemiology of emerging infectious diseases in natural and human-altered ecosystems.Annu Rev Phytopathol. 2012;50:379-402. doi: 10.1146/annurev-phyto-081211-172938. Epub 2012 Jun 6. Annu Rev Phytopathol. 2012. PMID: 22681449 Review.
-
SIS along a continuum (SIS(c)) epidemiological modelling and control of diseases on directed trade networks.Math Biosci. 2012 Mar;236(1):44-52. doi: 10.1016/j.mbs.2012.01.004. Epub 2012 Jan 28. Math Biosci. 2012. PMID: 22306763
-
Modelling disease spread and control in networks: implications for plant sciences.New Phytol. 2007;174(2):279-297. doi: 10.1111/j.1469-8137.2007.02028.x. New Phytol. 2007. PMID: 17388891 Review.
Cited by
-
Modeling Epidemics in Seed Systems and Landscapes To Guide Management Strategies: The Case of Sweet Potato in Northern Uganda.Phytopathology. 2019 Sep;109(9):1519-1532. doi: 10.1094/PHYTO-03-18-0072-R. Epub 2019 Aug 13. Phytopathology. 2019. PMID: 30785374 Free PMC article.
-
Network epidemiology and plant trade networks.AoB Plants. 2014 Apr 29;6(0):plu007. doi: 10.1093/aobpla/plu007. Print 2014. AoB Plants. 2014. PMID: 24790128 Free PMC article.
-
Using a network model to assess risk of forest pest spread via recreational travel.PLoS One. 2014 Jul 9;9(7):e102105. doi: 10.1371/journal.pone.0102105. eCollection 2014. PLoS One. 2014. PMID: 25007186 Free PMC article.
-
Forest health in a changing world.Microb Ecol. 2015 May;69(4):826-42. doi: 10.1007/s00248-014-0545-8. Epub 2014 Dec 13. Microb Ecol. 2015. PMID: 25502075 Review.
-
The Epidemiology of Plant Virus Disease: Towards a New Synthesis.Plants (Basel). 2020 Dec 14;9(12):1768. doi: 10.3390/plants9121768. Plants (Basel). 2020. PMID: 33327457 Free PMC article. Review.
Publication types
MeSH terms
LinkOut - more resources
Full Text Sources