Call for a quality standard for sequence-based assays in clinical microbiology: necessity for quality assessment of sequences used in microbial identification and typing
- PMID: 21068275
- PMCID: PMC3020486
- DOI: 10.1128/JCM.01918-10
Call for a quality standard for sequence-based assays in clinical microbiology: necessity for quality assessment of sequences used in microbial identification and typing
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References
-
- Ahmad-Nejad, P., A. Dorn-Beineke, U. Pfeiffer, J. Brade, W. J. Geilenkeuser, S. Ramsden, M. Pazzagli, and M. Neumaier. 2006. Methodologic European external quality assurance for DNA sequencing: the EQUALseq program. Clin. Chem. 52:716-727. - PubMed
-
- Arnold, C., L. Westland, G. Mowat, A. Underwood, J. Magee, and S. Gharbia. 2005. Single-nucleotide polymorphism-based differentiation and drug resistance detection in Mycobacterium tuberculosis from isolates or directly from sputum. Clin. Microbiol. Infect. 11:122-130. - PubMed
-
- Bright, R. A., D. K. Shay, B. Shu, N. J. Cox, and A. I. Klimov. 2006. Adamantane resistance among influenza A viruses isolated early during the 2005-2006 influenza season in the United States. JAMA 295:891-894. - PubMed
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