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Review
. 2011 Mar;12(3):167-78.
doi: 10.1038/nrg2933.

Cleft lip and palate: understanding genetic and environmental influences

Affiliations
Review

Cleft lip and palate: understanding genetic and environmental influences

Michael J Dixon et al. Nat Rev Genet. 2011 Mar.

Abstract

Clefts of the lip and/or palate (CLP) are common birth defects of complex aetiology. CLP can occur in isolation or as part of a broad range of chromosomal, Mendelian or teratogenic syndromes. Although there has been marked progress in identifying genetic and environmental triggers for syndromic CLP, the aetiology of the more common non-syndromic (isolated) forms remains poorly characterized. Recently, using a combination of epidemiology, careful phenotyping, genome-wide association studies and analysis of animal models, several distinct genetic and environmental risk factors have been identified and confirmed for non-syndromic CLP. These findings have advanced our understanding of developmental biology and created new opportunities for clinical translational research.

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Figures

Figure 1
Figure 1. Development of the lip and palate
Schematic diagrams of the development of the lip and palate in humans. (A) The developing frontonasal prominence, paired maxillary processes and paired mandibular processes surround the primitive oral cavity by the fourth week of embryonic development. (B) By the fifth week, the nasal pits have formed, which leads to formation of the paired medial and lateral nasal processes. (C) The medial nasal processes have merged with the maxillary processes to form the upper lip and primary palate by the end of the sixth week. The lateral nasal processes form the nasal alae. Similarly, the mandibular processes fuse to form the lower jaw. (D) During the sixth week of embryogenesis, the secondary palate develops as bilateral outgrowths from the maxillary processes which grow vertically down the side of the tongue. (E) Subsequently, the palatal shelves elevate to a horizontal position above the tongue, contact one another and commence fusion. (F) Fusion of the palatal shelves ultimately divides the oronasal space into separate oral and nasal cavities. Figure is modified with permission from REF Copyright permission**
Figure 2
Figure 2. Types of cleft
A: A collection of images of different types of clefts, some with associated anomalies such as lip pits. a–c, Van der Woude syndrome cases with associated lip pits; d, isolated cleft palate only; e, isolated unilateral cleft lip and palate; f–m, syndromic forms of clefting (f, CLP in Smith-Lemli-Opitz syndrome; g, midline cleft in holoproencephaly; h, bilateral CLP in TGIF mutation case and I, bilateral CLP in SHH variant; j, midline notch in OFD type 1; k, repaired cleft in MID1 mutation; l, repaired unilateral CLP and; m, pseudo cleft lip). [Legend to be modified depending on images provided. Include image permission details.] B: A set of illustrative drawings of CLP types. a and e show unilateral and bilateral clefts of the soft palate; b, c and d show degrees of unilateral cleft lip and palate; f, g and h show degrees of bilateral cleft lip and palate. This figure is modified from REF. , with permission. Copyright Macmillan 2002.
Figure 3
Figure 3. Sub-clinical phenotypes
a: Photographs of the upper lip region for each member of a nuclear family with two family members affected with nonsyndromic CLP (surgically repaired). The other three family members do not have externally visible defects, but two of them have sub-clinical defects of the orbicularis oris muscle (pedigree symbols circled in red). b: The upper lip ultrasounds of each member of the family shown in panel a. Note the disruptions in the orbicularis oris muscle in the two people with CLP in the family, plus in two people with no external manifestation (pedigree symbols circled in red).

References

    1. Wehby G, Cassell CH. The impact of orofacial clefts on quality of life and healthcare use and costs. Oral Dis. 2010;16:3–10. - PMC - PubMed
    1. Marazita M, Lidral AC, Murray JC, Field LL, Maher BS, McHenry TG, Cooper ME, Govil M, Daack-Hirsch S, Riley B, Jugessur A, Felix T, Moreno L, Mansilla MA, Vieira AR, Doheny K, Pugh E, Valencia-Ramirez C, Arcos-Burgos M. Genome scan, fine-mapping, and candidate gene analysis of non-syndromic cleft lip with or without cleft palate reveals phenotype specific differences in linkage and association results. Hum Hered. 2009;68:151–170. - PMC - PubMed
    1. Birnbaum SLK, Reutter H, Herms S, Steffens M, Rubini M, Baluardo C, Ferrian M, Almeida de Assis N, Alblas MA, Barth S, Freudenberg J, Lauster C, Schmidt G, Scheer M, Braumann B, Bergé SJ, Reich RH, Schiefke F, Hemprich A, Pötzsch S, Steegers-Theunissen RP, Pötzsch B, Moebus S, Horsthemke B, Kramer FJ, Wienker TF, Mossey PA, Propping P, Cichon S, Hoffmann P, Knapp M, Nöthen MM, Mangold E. Key susceptibility locus for nonsyndromic cleft lip with or without cleft palate on chromosome 8q24. Nat Genet. 2009;41:473–477. This is the first successful genome wide association study in clefting and identified a very significant and previously unsuspected locus for clefts at 8q24 in a large gene dessert.

    1. Grant S, Wang K, Zhang H, Glaberson W, Annaiah K, Kim CE, Bradfield JP, Glessner JT, Thomas KA, Garris M, Frackelton EC, Otieno FG, Chiavacci RM, Nah HD, Kirschner RE, Hakonarson H. A genome-wide association study identifies a locus for nonsyndromic cleft lip with or without cleft palate on 8q24. J Pediatr. 2009;155:909–913. - PubMed
    1. Mangold E, Ludwig KU, Birnbaum S, Baluardo C, Ferrian M, Herms S, Reutter H, de Assis NA, Chawa TA, Mattheisen M, Steffens M, Barth S, Kluck N, Paul A, Becker J, Lauster C, Schmidt G, Braumann B, Scheer M, Reich RH, Hemprich A, Pötzsch S, Blaumeiser B, Moebus S, Krawczak M, Schreiber S, Meitinger T, Wichmann HE, Steegers-Theunissen RP, Kramer FJ, Cichon S, Propping P, Wienker TF, Knapp M, Rubini M, Mossey PA, Hoffmann P, Nöthen MM. Genome-wide association study identifies two susceptibility loci for nonsyndromic cleft lip with or without cleft palate. Nat Genet. 2010;42:24–26. - PubMed

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