Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2011 Jun;35(4):275-93.
doi: 10.1016/j.compmedimag.2011.01.005. Epub 2011 Feb 22.

Quantization and analysis of hippocampal morphometric changes due to dementia of Alzheimer type using metric distances based on large deformation diffeomorphic metric mapping

Affiliations

Quantization and analysis of hippocampal morphometric changes due to dementia of Alzheimer type using metric distances based on large deformation diffeomorphic metric mapping

Elvan Ceyhan et al. Comput Med Imaging Graph. 2011 Jun.

Abstract

The metric distance obtained from the large deformation diffeomorphic metric mapping (LDDMM) algorithm is used to quantize changes in morphometry of brain structures due to neuropsychiatric diseases. For illustrative purposes we consider changes in hippocampal morphometry (shape and size) due to very mild dementia of the Alzheimer type (DAT). LDDMM, which was previously used to calculate dense one-to-one correspondence vector fields between hippocampal shapes, measures the morphometric differences with respect to a template hippocampus by assigning metric distances on the space of anatomical images thereby allowing for direct comparison of morphometric differences. We characterize what information the metric distances provide in terms of size and shape given the hippocampal, brain and intracranial volumes. We demonstrate that metric distance is a measure of morphometry (i.e., shape and size) but mostly a measure of shape, while volume is mostly a measure of size. Moreover, we show how metric distances can be used in cross-sectional, longitudinal analysis, as well as left-right asymmetry comparisons, and provide how the metric distances can serve as a discriminative tool using logistic regression. Thus, we show that metric distances with respect to a template computed via LDDMM can be a powerful tool in detecting differences in shape.

PubMed Disclaimer

Figures

Figure 1
Figure 1
Change in metric distance during diffeomorphic flow from template (I0) to target ( I1=ϕ1I0=I0ϕ11). The numbers are the metric distance estimates at the three intermediate stages and the final stage of the LDDMM algorithm.
Figure 2
Figure 2
Generation of metric distances dk{b,f} for subjects k = 1, … , 44 at baseline (b) and at follow-up (f).
Figure 3
Figure 3
Pairs plots of the continuous variables for the hippocampi at baseline and follow-up. HLV: volume of left hippocampus; HRV: volume of right hippocampus; HLM: metric distance for left hippocampus; HRM: metric distance for right hippocampus; BV: brain volume; ICV: intracranial volume. The numbers 1 and 3 stand for year 1 (i.e., baseline) and year 3 (i.e., follow-up), respectively.
Figure 4
Figure 4
Scatter plots of the metric distances for the left and right distances at baseline and follow-up. The metric distances are jittered for better visualization and the crosses represent the mean distance values.
Figure 5
Figure 5
Interaction plots for diagnosis levels over the timepoint levels for left and right metric distances demonstrating that the slopes are different between diagnostic groups (with slope differences in the right being larger).
Figure 6
Figure 6
Fitted probability for having mild dementia (CDR0.5) and observed proportion in metric distances with model (9) (top-left); model (10) (top-right); and model (11) (bottom),

References

    1. Hogan RE, Wang L, Bertrand ME, Willmore LJ, Bucholz RD, Nassif AS, Csernansky JG. MRI-based high-dimensional hippocampal mapping in mesial temporal lobe epilepsy. Brain. 2004;127(8):1731–1740. - PubMed
    1. Miller MI. Computational anatomy: shape, growth, and atrophy comparison via diffeomorphisms. Neuroimage. 2004;23(Suppl 1):S19–33. - PubMed
    1. Thompson PM, Hayashi KM, Sowell ER, Gogtay N, Giedd JN, Rapoport JL, de Zubicaray GI, Janke AL, Rose SE, Semple J, Doddrell DM, Wang YL, van Erp TGM, Cannon TD, Toga AW. Mapping cortical change in Alzheimer’s disease, brain development, and schizophrenia. Neuroimage. 2004;23:S2–S18. - PubMed
    1. Grenander U, Miller MI. Computational anatomy: An emerging discipline. Quarterly of Applied Mathematics. 1998;56(4):617–694.
    1. Toga AW. Computational biology for visualization of brain structure. Anatomy and Embryology. 2005;210(5-6):433–438. - PubMed

Publication types