Identification of Escherichia coli, Klebsiella pneumoniae, and Pseudomonas aeruginosa in blood cultures: a multicenter performance evaluation of a three-color peptide nucleic acid fluorescence in situ hybridization assay
- PMID: 21490185
- PMCID: PMC3122727
- DOI: 10.1128/JCM.02250-10
Identification of Escherichia coli, Klebsiella pneumoniae, and Pseudomonas aeruginosa in blood cultures: a multicenter performance evaluation of a three-color peptide nucleic acid fluorescence in situ hybridization assay
Abstract
A multicenter evaluation was undertaken to evaluate the performance of a new three-color peptide nucleic acid fluorescence in situ hybridization assay that identifies isolates directly from blood cultures positive for Gram-negative bacilli (GNB). The assay correctly identified 100% (186/186) of the Escherichia coli isolates, 99.1% (109/110) of the Klebsiella pneumoniae isolates, and 95.8% (46/48) of the Pseudomonas aeruginosa isolates in this study. Negative assay results were correctly obtained for 162 of 165 other GNB (specificity, 98.2%).
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References
-
- Alexander B. D., Ashley E. D., Reller L. B., Reed S. D. 2006. Cost savings with implementation of PNA FISH testing for identification of Candida albicans in blood cultures. Diagn. Microbiol. Infect. Dis. 54:277–282 - PubMed
-
- Forrest G. N., Mehta S., Weekes E., Lincalis D. P., Johnson. J. K., Venezia R. A. 2006. Impact of rapid in situ hybridization testing on coagulase-negative staphylococci positive blood cultures. J. Antimicrob. Chemother. 58:154–158 - PubMed
-
- Gaynes R., Edwards J., and the National Nosocomial Infectious Surveillance System 2005. Overview of nosocomial infections caused by gram-negative bacilli. Clin. Infect. Dis. 41:848–854 - PubMed
-
- Hansen D. S., Leerbeck L., Kofod H., Bruun B. 2010. Rapid same-day identification of 69% of bacteria and yeast from positive blood culture bottles using five PNA FISH fluorescence in situ hybridization probes, abstr. P1804. Abstr. 20th ESCMID, Vienna, Austria, 10 to 13 April 2010
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