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. 2011 Jun 20:11:175.
doi: 10.1186/1471-2334-11-175.

Early acquisition and high nasopharyngeal co-colonisation by Streptococcus pneumoniae and three respiratory pathogens amongst Gambian new-borns and infants

Brenda A Kwambana  1 , Michael R Barer, Christian Bottomley, Richard A Adegbola, Martin Antonio
Affiliations

Early acquisition and high nasopharyngeal co-colonisation by Streptococcus pneumoniae and three respiratory pathogens amongst Gambian new-borns and infants

Brenda A Kwambana et al. BMC Infect Dis. .

Abstract

Background: Although Haemophilus influenzae type b (Hib), Staphylococcus aureus and Moraxella catarrhalis are important causes of invasive and mucosal bacterial disease among children, co-carriage with Streptococcus pneumoniae during infancy has not been determined in West Africa.

Methods: Species specific PCR was applied to detect each microbe using purified genomic DNA from 498 nasopharyngeal (NP) swabs collected from 30 Gambian neonates every two weeks from 0 to 6 months and bi-monthly up to 12 months.

Results: All infants carried S. pneumoniae, H. influenzae and M. catarrhalis at several time points during infancy. S.pneumoniae co-colonized the infant nasopharynx with at least one other pathogen nine out of ten times. There was early colonization of the newborns and neonates, the average times to first detection were 5, 7, 3 and 14 weeks for S. pneumoniae, H. influenzae, M. catarrhalis and S. aureus respectively. The prevalence of S. pneumoniae, H. influenzae and M. catarrhalis increased among the neonates and exceeded 80% by 13, 15 and 23 weeks respectively. In contrast, the prevalence of S. aureus decreased from 50% among the newborns to 20% amongst nine-week old neonates. S. pneumoniae appeared to have a strong positive association with H. influenzae (OR 5.03; 95% CI 3.02, 8.39; p<0.01) and M. catarrhalis (OR 2.20; 95% CI 1.29; p<0.01) but it was negatively associated with S. aureus (OR 0.53; 95% CI 0.30, 0.94; p=0.03).

Conclusion: This study shows early acquisition and high co-carriage of three important respiratory pathogens with S. pneumoniae in the nasopharyngeal mucosa among Gambian neonates and infants. This has important potential implications for the aetiology of respiratory polymicrobial infections, biofilm formation and vaccine strategies.

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Figures

Figure 1
Figure 1
Carriage of S. pneumoniae and three respiratory pathogens in the first year of life. The point prevalence of S. pneumoniae and three respiratory in the nasopharynx among 30 infants followed-up from birth to one year (A). The average prevalence of H. influenzae, encapsulated H. influenzae and Hib in the nasopharynx among 30 infants followed-up from birth to one year (B).
Figure 2
Figure 2
Survival curve for time to first detection of S. pneumoniae and three respiratory pathogens among 30 infants followed-up from birth to one year.
Figure 3
Figure 3
Heatmap showing co-carriage of S. pneumoniae with three respiratory pathogens in the nasopharynx among 30 infants followed up from birth to one year.
See this image and copyright information in PMC

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