Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
Review
. 2012 Jan;2(1):a007732.
doi: 10.1101/cshperspect.a007732.

Genetics of type 1 diabetes

Affiliations
Review

Genetics of type 1 diabetes

Janelle A Noble et al. Cold Spring Harb Perspect Med. 2012 Jan.

Abstract

Genetic susceptibility to type 1 diabetes (T1D) has been a subject of intensive study for nearly four decades. This article will present the history of these studies, beginning with observations of the Human Leukocyte Antigen (HLA) association in the 1970s, through the advent of DNA-based genotyping methodologies, through recent large, international collaborations and genome-wide association studies. More than 40 genetic loci have been associated with T1D in multiple studies; however, the HLA region, with its multiple genes and extreme polymorphism at those loci, remains by far the greatest contributor to the genetic susceptibility to T1D. Even after decades of study, the complete story has yet to unfold, and exact mechanisms by which HLA and other associated loci confer T1D susceptibility remain elusive.

PubMed Disclaimer

Figures

Figure 1.
Figure 1.
Schematic representation of selected genes in the HLA region. Classical HLA genes are shown in black. Other T1D-associated genes are shown with patterned boxes. Gray boxes show genes not reported to be T1D-associated. Approximate boundaries of class I, class III, and class II regions are indicated by brackets.
Figure 2.
Figure 2.
(A) Schematic representation of HLA class II and class I molecules. Protein domains are depicted as gray circles, plasma membrane is depicted by black ball and stick motifs, transmembrane regions are depicted as lines going through the plasma membrane, and the peptide antigen is depicted as a black diamond. (B) Schematic representation of the trimolecular complex. HLA molecule and peptide are depicted as in A; T-cell receptor is depicted as a gray Y-shape that contacts both the HLA molecule and the peptide antigen.
Figure 3.
Figure 3.
Trans-encoded heterodimers. DR3 and DR4 haplotypes from the highly predisposing DR3/DR4 genotype are shown; putative high-T1D-risk heterodimers encoded in trans are circled.

References

    1. Aly TA, Eller E, Ide A, Gowan K, Babu SR, Erlich HA, Rewers MJ, Eisenbarth GS, Fain PR 2006. Multi-SNP analysis of MHC region: Remarkable conservation of HLA-A1-B8-DR3 haplotype. Diabetes 55: 1265–1269 - PubMed
    1. Barrett JC, Clayton DG, Concannon P, Akolkar B, Cooper JD, Erlich HA, Julier C, Morahan G, Nerup J, Nierras C, et al. 2009. Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes. Nat Genet 41: 703–707 - PMC - PubMed
    1. Baschal EE, Aly TA, Babu SR, Fernando MS, Yu L, Miao D, Barriga KJ, Norris JM, Noble JA, Erlich HA, et al. 2007. HLA-DPB1*0402 protects against type 1A diabetes autoimmunity in the highest risk DR3-DQB1*0201/DR4-DQB1*0302 DAISY population. Diabetes 56: 2405–2409 - PubMed
    1. Baschal EE, Baker PR, Eyring KR, Siebert JC, Jasinski JM, Eisenbarth GS 2011. The HLA-B*3906 allele imparts a high risk of diabetes only on specific HLA-DR/DQ haplotypes. Diabetologia 54: 1702–1709 - PMC - PubMed
    1. Begovich AB, Carlton VE, Honigberg LA, Schrodi SJ, Chokkalingam AP, Alexander HC, Ardlie KG, Huang Q, Smith AM, Spoerke JM, et al. 2004. A missense single-nucleotide polymorphism in a gene encoding a protein tyrosine phosphatase (PTPN22) is associated with rheumatoid arthritis. Am J Hum Genet 75: 330–337 - PMC - PubMed