Antarctic DNA moving forward: genomic plasticity and biotechnological potential
- PMID: 22360528
- DOI: 10.1111/j.1574-6968.2012.02531.x
Antarctic DNA moving forward: genomic plasticity and biotechnological potential
Abstract
Antarctica is the coldest, driest, and windiest continent, where only cold-adapted organisms survive. It has been frequently cited as a pristine place, but it has a highly diverse microbial community that is continually seeded by nonindigenous microorganisms. In addition to the intromission of 'alien' microorganisms, global warming strongly affects microbial Antarctic communities, changing the genes (qualitatively and quantitatively) potentially available for horizontal gene transfer. Several mobile genetic elements have been described in Antarctic bacteria (including plasmids, transposons, integrons, and genomic islands), and the data support that they are actively involved in bacterial evolution in the Antarctic environment. In addition, this environment is a genomic source for the identification of novel molecules, and many investigators have used culture-dependent and culture-independent approaches to identify cold-adapted proteins. Some of them are described in this review. We also describe studies for the design of new recombinant technologies for the production of 'difficult' proteins.
© 2012 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.
Similar articles
-
Exploring the Antarctic soil metagenome as a source of novel cold-adapted enzymes and genetic mobile elements.Rev Argent Microbiol. 2011 Apr-May;43(2):94-103. doi: 10.1590/S0325-75412011000200005. Rev Argent Microbiol. 2011. PMID: 21731970
-
Mobile genetic elements: the agents of open source evolution.Nat Rev Microbiol. 2005 Sep;3(9):722-32. doi: 10.1038/nrmicro1235. Nat Rev Microbiol. 2005. PMID: 16138100 Review.
-
Coastal Synechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity.Environ Microbiol. 2009 Feb;11(2):349-59. doi: 10.1111/j.1462-2920.2008.01772.x. Environ Microbiol. 2009. PMID: 19196269
-
Horizontal gene transfer and mobile genetic elements in marine systems.Methods Mol Biol. 2009;532:435-53. doi: 10.1007/978-1-60327-853-9_25. Methods Mol Biol. 2009. PMID: 19271200 Review.
-
Strategies for accessing soil metagenome for desired applications.Biotechnol Adv. 2008 Nov-Dec;26(6):576-90. doi: 10.1016/j.biotechadv.2008.08.002. Epub 2008 Aug 22. Biotechnol Adv. 2008. PMID: 18786627 Review.
Cited by
-
Characterization of culturable Paenibacillus spp. from the snow surface on the high Antarctic Plateau (DOME C) and their dissemination in the Concordia research station.Extremophiles. 2013 Jul;17(4):565-73. doi: 10.1007/s00792-013-0539-3. Epub 2013 Apr 16. Extremophiles. 2013. PMID: 23588647
-
Draft genome sequences of bacteria isolated from the Deschampsia antarctica phyllosphere.Extremophiles. 2018 May;22(3):537-552. doi: 10.1007/s00792-018-1015-x. Epub 2018 Feb 28. Extremophiles. 2018. PMID: 29492666
-
Antibacterial Polyketides from Antarctica Sponge-Derived Fungus Penicillium sp. HDN151272.Mar Drugs. 2020 Jan 23;18(2):71. doi: 10.3390/md18020071. Mar Drugs. 2020. PMID: 31979231 Free PMC article.
-
Phylogenetic MLSA and phenotypic analysis identification of three probable novel Pseudomonas species isolated on King George Island, South Shetland, Antarctica.Braz J Microbiol. 2018 Oct-Dec;49(4):695-702. doi: 10.1016/j.bjm.2018.02.005. Epub 2018 Mar 15. Braz J Microbiol. 2018. PMID: 29598976 Free PMC article.
-
A highly efficient and cost-effective recombinant production of a bacterial photolyase from the Antarctic isolate Hymenobacter sp. UV11.Extremophiles. 2019 Jan;23(1):49-57. doi: 10.1007/s00792-018-1059-y. Epub 2018 Sep 28. Extremophiles. 2019. PMID: 30267301
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources