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. 2012 Sep 1;22(17):5707-13.
doi: 10.1016/j.bmcl.2012.06.077. Epub 2012 Jun 30.

Design and synthesis of Pictet-Spengler condensation products that exhibit oncogenic-RAS synthetic lethality and induce non-apoptotic cell death

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Design and synthesis of Pictet-Spengler condensation products that exhibit oncogenic-RAS synthetic lethality and induce non-apoptotic cell death

Rachid Skouta et al. Bioorg Med Chem Lett. .

Abstract

A series of Pictet-Spengler condensation derivatives (tetrahydro-β-carbolines) was designed, synthesized and evaluated for lethality against a panel of seven cancer cell lines. Seven compounds (2a, 13, 20, 21, 27, 29 and 34) showed lethality in at least five cell lines. Among these, compound 27 showed a unique selectivity towards oncogenic-RAS expressing BJ-TERT/LT/ST/RAS(V12) tumor cells, compared to non-transformed BJ-TERT cells. Further investigation revealed that 27 induces cell death without activation of caspases. This represents a useful new probe of non-apoptotic cell death and oncogenic-RAS synthetic lethality.

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Figures

Figure 1
Figure 1
Structures of small molecules explored in this study.
Figure 2
Figure 2
Compound 27 exhibits RAS synthetic lethality and induces non-apoptotic cell death.
Figure 3
Figure 3
Reactive oxygen species (ROS) levels in BJ-TERT/LT/ST/RASV12 cells.
Scheme 1
Scheme 1
Synthesis of barbituric acid analogs 8 and 10 linked through 1 carbon spacer, (a): OHCCH(OMe)2, 5% TFA, CH2Cl2, r.t., 17h. (b) KMnO4, THF, r.t., 17h. (c) AcOH/H2O (2:3 ratio), 120 °C, 1h. (d) (Boc)2O, DMAP, THF, r.t., 17h. (e) CH3I, NaH, DMF, r.t., 4h. (f) Diludine, proline (10 mol%), CH3CN, r.t., 48h. (g): HCl 4.0 M, dioxane, 80 °C, 17h.
Scheme 2
Scheme 2
Synthesis of barbituric acid analogs 15 and 17 linked through 2 carbon spacer, (a): C6H5CHO, toluene, then NaBH4, MeOH, r.t., 17h. (b) HCCCO2Me, MeOH then 5% TFA, CH2Cl2, r.t., 17h. (c) H2, Pd/C, AcOH, 120 °C, 1h. (d) (Boc)2O, DMAP, THF, r.t., 17h. (e) Dibal-H, THF, −78 °C -r.t., 17h. (f) DMP, NaHCO3, CH2Cl2, 2h, r.t., 17h.(g) Diludine, proline (10 mol%), CH3CN, r.t., 48h. (h): HCl 4.0 M, dioxane, 80 °C, 17h.
Scheme 3
Scheme 3
Synthesis of tetrahydro-β–carboline analogs 25–31, (a): CH2Cl2, 45 °C, 4h, then 5% TFA at −78 °C to r.t., 17h. (b) DIPEA, methyl chloroformate, CH2Cl2, r.t, 17h. (c) CH3I, NaH, DMF, r.t., 17h. (d) (Boc)2O (1 equiv.), DMAP, THF, r.t., 17h. (e) DIPEA, benzyl chloroformate, CH2Cl2, r.t, 17h. (f) BnBr, NaH, DMF, r.t., 17h.
Scheme 4
Scheme 4
Synthesis of tetrahydro-β–carboline analogs 33–35, (a): Glyoxal dimethyl acetal, 60% aqueous solution, CH2Cl2, 45 °C, 4h, then 5% TFA at −78 °C to r.t., 17h. (b) methyl chloroformate, DIPEA, CH2Cl2, r.t, 17h. (c) (Boc)2O (1 equiv.), DMAP, THF, r.t., 17h. (d) DIPEA, benzyl chloroformate, CH2Cl2, r.t, 17h. (e) BnBr, K2CO3, DMF, r.t., 17h.

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