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Meta-Analysis
. 2012 Dec;20(12):2431-7.
doi: 10.1038/oby.2012.162. Epub 2012 Jun 22.

Copy number variations associated with obesity-related traits in African Americans: a joint analysis between GENOA and HyperGEN

Affiliations
Meta-Analysis

Copy number variations associated with obesity-related traits in African Americans: a joint analysis between GENOA and HyperGEN

Wei Zhao et al. Obesity (Silver Spring). 2012 Dec.

Abstract

Obesity is a highly heritable trait and a growing public health problem. African Americans (AAs) are a genetically diverse, yet understudied population with a high prevalence of obesity (BMI >30 kg/m(2)). Recent studies based upon single-nucleotide polymorphisms (SNPs) have identified genetic markers associated with obesity. However, a large proportion of the heritability of obesity remains unexplained. Copy number variation (CNV) has been cited as a possible source of missing heritability in common diseases such as obesity. We conducted a CNV genome-wide association study of BMI in two African-American cohorts from Genetic Epidemiology Network of Arteriopathy (GENOA) and Hypertension Genetic Epidemiology Network (HyperGEN). We performed independent and identical association analyses in each study, then combined the results in a meta-analysis. We identified three CNVs associated with BMI, obesity, and other obesity-related traits after adjusting for multiple testing. These CNVs overlap the PARK2, GYPA, and SGCZ genes. Our results suggest that CNV may play a role in the etiology of obesity in AAs.

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Figures

Figure 1
Figure 1
The relationship of BMI and the three significant CNVs (CNP11162, CNP10809 and CNP11421). A: Box plots of BMI with different copies of CNVs in GENOA; B: Box plots of BMI with different copies of CNVs in HyperGEN

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