Interactions in supramolecular complexes involving arenes: experimental studies
- PMID: 22853652
- DOI: 10.1021/ar3000579
Interactions in supramolecular complexes involving arenes: experimental studies
Abstract
The process of learning by doing has fueled supramolecular chemistry and, more specifically, the understanding of noncovalent aromatic interactions in synthetic and natural systems. The preparation of new host molecules and the investigation of their complexations have produced many insights into significant noncovalent binding mechanisms. In this Account, we attempt to discuss significant binding contributions involving aromatic units and their practical applications. We use typical examples from our group and the literature, but this Account is not a comprehensive view of the field. Other than systems with saturated frameworks, host compounds based on arenes offer better controlled conformations and active interactions with many guest molecules. Because of their fluorescent properties, larger aryl systems are particularly suitable for sensors. The noncovalent interactions observed with different supramolecular complexes can be compared and exploited for interactions with biopolymers such as nucleic acids. Complexes formed with cyclophanes have been a constant source of inspiration for understanding noncovalent forces and their use for the design of functional supramolecular systems. Other than cyclodextrins or ionophores, which occur in nature, arene-based macrocycles are synthetic and provide more opportunities for structural variations than other macrocycles. These derivatives allow researchers to study and to exploit an unusually broad variety of binding mechanisms in both aqueous and organic media. Systematic analyses of complexes with different substituents and structures in solution, based also on flat aromatic systems such as porphyrins, can lead to a consistent picture of the noncovalent forces that dominate in these systems. These studies have elucidated attractive interactions between many heteroatoms and π systems including cyclopropanes . Through systematic analysis of the equilibrium measurements one can derive binding free energy increments for different interactions. The increments are usually additive and provide predictive tools for the design of new supramolecular systems, benchmarks for computational approaches, and an aid for drug design. In aqueous media, the major noncovalent forces between different aryl systems or between arenes and heteroatoms of larger polarizibility are dispersive, and hydrophobic forces play a minor role. In several examples, we show that electrostatic forces also contribute significantly if donor and acceptor groups show complimentarity. In early investigations, researchers found cation-π and, to a lesser degree, anion-π interactions with several cyclophanes in systems where the host or the guest molecules bear charges in an orientation that facilitates contact between charged and aryl portions of the molecules. In supramolecular complexes, hydrogen bonding effects are usually only visible in apolar media, but very strong acceptors such as phenolate anions can also work in water. To facilitate potential applications, researchers have primarily developed water-soluble, arene-containing receptors through the implementation of permanent charges. Supramolecular complexes that mimic enzymes can also rely on aryl interactions. Examples in this Account illustrate that the conformation of host-guest complexes may differ significantly between the solid and solution state, and suitable spectroscopic methods are needed to observe and control these conformations.
Similar articles
-
Understanding substituent effects in noncovalent interactions involving aromatic rings.Acc Chem Res. 2013 Apr 16;46(4):1029-38. doi: 10.1021/ar300109n. Epub 2012 Jun 22. Acc Chem Res. 2013. PMID: 22725832
-
Nitrogen and oxygen bridged calixaromatics: synthesis, structure, functionalization, and molecular recognition.Acc Chem Res. 2012 Feb 21;45(2):182-95. doi: 10.1021/ar200108c. Epub 2011 Aug 11. Acc Chem Res. 2012. PMID: 21834499
-
Supramolecular polymers constructed from macrocycle-based host-guest molecular recognition motifs.Acc Chem Res. 2014 Jul 15;47(7):1982-94. doi: 10.1021/ar5000456. Epub 2014 Mar 31. Acc Chem Res. 2014. PMID: 24684594
-
Structural diversity in expanded porphyrins.Acc Chem Res. 2008 Feb;41(2):265-79. doi: 10.1021/ar700091k. Epub 2008 Feb 19. Acc Chem Res. 2008. PMID: 18281947 Review.
-
Principles of Cation-π Interactions for Engineering Mussel-Inspired Functional Materials.Acc Chem Res. 2022 Apr 19;55(8):1171-1182. doi: 10.1021/acs.accounts.2c00068. Epub 2022 Mar 28. Acc Chem Res. 2022. PMID: 35344662 Review.
Cited by
-
Molecular tweezers for lysine and arginine - powerful inhibitors of pathologic protein aggregation.Chem Commun (Camb). 2016 Oct 15;52(76):11318-34. doi: 10.1039/c6cc04640a. Epub 2016 Aug 22. Chem Commun (Camb). 2016. PMID: 27546596 Free PMC article.
-
Dispersion Interactions in Condensed Phases and inside Molecular Containers.Acc Chem Res. 2023 Dec 5;56(23):3451-3461. doi: 10.1021/acs.accounts.3c00523. Epub 2023 Nov 13. Acc Chem Res. 2023. PMID: 37956240 Free PMC article.
-
Native Top-Down Mass Spectrometry and Ion Mobility Spectrometry of the Interaction of Tau Protein with a Molecular Tweezer Assembly Modulator.J Am Soc Mass Spectrom. 2019 Jan;30(1):16-23. doi: 10.1007/s13361-018-2027-6. Epub 2018 Jul 30. J Am Soc Mass Spectrom. 2019. PMID: 30062477 Free PMC article.
-
Structure and electronic spectra of purine-methyl viologen charge transfer complexes.J Phys Chem B. 2014 Jan 9;118(1):125-33. doi: 10.1021/jp410348b. Epub 2013 Dec 23. J Phys Chem B. 2014. PMID: 24294996 Free PMC article.
-
Rapid Access to Chiral and Tripodal Cavitands from β-Pinene.Chemistry. 2022 Dec 27;28(72):e202202416. doi: 10.1002/chem.202202416. Epub 2022 Nov 7. Chemistry. 2022. PMID: 36168151 Free PMC article.
LinkOut - more resources
Full Text Sources
Research Materials
Miscellaneous