Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2013 Jan 1;20(1):117-21.
doi: 10.1136/amiajnl-2012-001145. Epub 2012 Sep 6.

Next-generation phenotyping of electronic health records

Affiliations

Next-generation phenotyping of electronic health records

George Hripcsak et al. J Am Med Inform Assoc. .

Abstract

The national adoption of electronic health records (EHR) promises to make an unprecedented amount of data available for clinical research, but the data are complex, inaccurate, and frequently missing, and the record reflects complex processes aside from the patient's physiological state. We believe that the path forward requires studying the EHR as an object of interest in itself, and that new models, learning from data, and collaboration will lead to efficient use of the valuable information currently locked in health records.

PubMed Disclaimer

Figures

Figure 1
Figure 1
Feedback loops in the electronic health record. The state of the patient varies, and it determines not only the value of the measurements in the record, but also the type and timing of the measurements.
Figure 2
Figure 2
Phenotyping and discovery. The raw electronic health record (EHR) data are an indirect reflection of the true patient state due to the recording process. Attempts to create phenotypes and discover knowledge must account for the recording. The healthcare process model represents the salient features of the recording process and informs the phenotyping and discovery.

References

    1. Blumenthal D, Tavenner M. The “meaningful use” regulation for electronic health records. N Engl J Med 2010;363:501–4 - PubMed
    1. Weiskopf NG, Weng C. Methods and dimensions of electronic health record data quality assessment: enabling reuse for clinical research. J Am Med Inform Assoc 2013;20:144–51 - PMC - PubMed
    1. Heitjan DF, Basu S. Distinguishing “missing at random” and “missing completely at random”. Am Statistician 1996;50:207–13
    1. Hogan WR, Wagner MM. Accuracy of data in computer-based patient records. J Am Med Inform Assoc 1997;4:342–55 - PMC - PubMed
    1. Sagreiya H, Altman RB. The utility of general purpose versus specialty clinical databases for research: warfarin dose estimation from extracted clinical variables. J Biomed Inform 2010;43:747–51 - PMC - PubMed

Publication types

MeSH terms