Whole-genome shotgun sequence of Rhodococcus species strain JVH1
- PMID: 22965106
- PMCID: PMC3457223
- DOI: 10.1128/JB.01066-12
Whole-genome shotgun sequence of Rhodococcus species strain JVH1
Abstract
Here we present a whole-genome shotgun sequence of Rhodococcus species strain JVH1, an organism capable of degrading a variety of organosulfur compounds. In particular, JVH1 is able to selectively cleave carbon-sulfur bonds within alkyl chains. A large number of oxygenases were identified, consistent with other members of the genus.
Similar articles
-
Biodegradation by members of the genus Rhodococcus: biochemistry, physiology, and genetic adaptation.Adv Appl Microbiol. 2006;59:1-29. doi: 10.1016/S0065-2164(06)59001-X. Adv Appl Microbiol. 2006. PMID: 16829254 Review. No abstract available.
-
Biodegradation of di-n-butyl phthalate by Rhodococcus sp. JDC-11 and molecular detection of 3, 4-phthalate dioxygenase gene.J Microbiol Biotechnol. 2010 Oct;20(10):1440-5. doi: 10.4014/jmb.1004.04034. J Microbiol Biotechnol. 2010. PMID: 21030830
-
Use of a novel fluorinated organosulfur compound to isolate bacteria capable of carbon-sulfur bond cleavage.Appl Environ Microbiol. 2004 Mar;70(3):1487-93. doi: 10.1128/AEM.70.3.1487-1493.2004. Appl Environ Microbiol. 2004. PMID: 15006770 Free PMC article.
-
Biodegradation of phenol by a highly tolerant strain Rhodococcus ruber C1: Biochemical characterization and comparative genome analysis.Ecotoxicol Environ Saf. 2021 Jan 15;208:111709. doi: 10.1016/j.ecoenv.2020.111709. Epub 2020 Nov 26. Ecotoxicol Environ Saf. 2021. PMID: 33396040
-
Biodegradation and Rhodococcus--masters of catabolic versatility.Curr Opin Biotechnol. 2005 Jun;16(3):282-90. doi: 10.1016/j.copbio.2005.04.007. Curr Opin Biotechnol. 2005. PMID: 15961029 Review.
Cited by
-
Enzymatic Degradation of Phenazines Can Generate Energy and Protect Sensitive Organisms from Toxicity.mBio. 2015 Oct 27;6(6):e01520-15. doi: 10.1128/mBio.01520-15. mBio. 2015. PMID: 26507234 Free PMC article.
-
Draft Genome Sequence of Rhodococcus sp. Strain 311R.Genome Announc. 2015 May 21;3(3):e00378-15. doi: 10.1128/genomeA.00378-15. Genome Announc. 2015. PMID: 25999565 Free PMC article.
-
Transcriptomic response of Gordonia sp. strain NB4-1Y when provided with 6:2 fluorotelomer sulfonamidoalkyl betaine or 6:2 fluorotelomer sulfonate as sole sulfur source.Biodegradation. 2020 Dec;31(4-6):407-422. doi: 10.1007/s10532-020-09917-8. Epub 2020 Nov 5. Biodegradation. 2020. PMID: 33150552 Free PMC article.
-
Complete Genome Sequence of Rhodococcus sp. Strain SGAir0479, Isolated from Indoor Air Collected in Singapore.Microbiol Resour Announc. 2019 Oct 3;8(40):e00622-19. doi: 10.1128/MRA.00622-19. Microbiol Resour Announc. 2019. PMID: 31582433 Free PMC article.
-
Preferential desulfurization of dibenzyl sulfide by an isolated Gordonia sp. IITR100.3 Biotech. 2015 Jun;5(3):237-243. doi: 10.1007/s13205-014-0221-1. Epub 2014 May 14. 3 Biotech. 2015. PMID: 28324288 Free PMC article.
References
-
- Darling AE, Mau B, Perna NT. 2010. progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement. PLoS One 5:e11147 doi:10.1371/journal.pone.0011147 - DOI - PMC - PubMed
-
- Eichhorn E, Leisinger T. 2001. Escherichia coli utilizes methanesulfonate and l-cysteate as sole sulfur sources for growth. FEMS Microbiol. Lett. 205:271–275 - PubMed
-
- Karp PD, Paley S, Romero P. 2002. The pathway tools software. Bioinformatics 18(Suppl 1):S225–S232 - PubMed
Publication types
MeSH terms
Substances
Associated data
- Actions
LinkOut - more resources
Full Text Sources
Molecular Biology Databases