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. 2012 Nov 25;31(22):7958-7968.
doi: 10.1021/om300612u. Epub 2012 Aug 15.

Mechanistic Insights into the Aerobic Cu(I)-Catalyzed Cross-Coupling of S-Acyl Thiosalicylamide Thiol Esters and Boronic Acids

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Mechanistic Insights into the Aerobic Cu(I)-Catalyzed Cross-Coupling of S-Acyl Thiosalicylamide Thiol Esters and Boronic Acids

Adrián Varela-Álvarez et al. Organometallics. .

Abstract

The Density Functional Theory (DFT) method is used to elucidate the nature of the active species and the mechanism of the aerobic CuI-catalyzed cross-coupling of S-acyl thiosalicylamide thiol esters and boronic acids reported previously (J. Am. Chem. Soc.2007, 129, 15734-15735; Angew. Chem., Int. Ed.2009,48, 1417-1421). The energetically lowest isomer of the proposed active species [LC(O)R1]Cu-(O2)-Cu[LC(O)R1]2+, 2a, (where L = thiolatosalicylamide) is found to be I1(OO,OO) with a μ-η2:η2-peroxo Cu2O2-core, while its isomers I2(OO,OO) with a bis-(μ-O) Cu2O2-core and I3(OO,OO) with a (μ-η11) Cu2O2-core lie only a few kcal/mol higher and separated by 4-7kcal/mol energy barriers. In all these isomers, the thiol ester is coordinated to the Cu-centers via its two O-ends. Isomers with (SO,OO) and (SO,SO) coordination modes of the thiol esters lie slightly higher and are separated with moderate energy barriers. We found the latter isomers to be vital for the reported CuI-templated cross-coupling of S-acyl thiosalicylamide thiol esters and boronic acids under aerobic conditions. The presence of an anion (halide, carboxylate modeled as formate) in the reaction medium is found to be necessary. Its coordination to the active catalyst I1(SO,SO) is the first step of the proposed anion-assisted transmetalation by boronic acid. Overall the transmetalation reaction requires 34.0 kcal/mol and is 24.0 kcal/mol exergonic. This conclusion is in reasonable agreement with available experiments. The C-C bond formation in the transmetalation product requires a 6.3 kcal/mol lower energy barrier and is highly exergonic.

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Figures

Figure 1
Figure 1
Calculated important transition states of the formate-assisted transmetalation in 2a by boronic acid and the C-C bond cross-coupling reactions. Here, we also present the atomic notations used in this paper.
Scheme 1
Scheme 1
The proposed mechanism of the CuI-templated aerobic cross-coupling of thioorganic and boronic (see Ref. 5)
Scheme 2
Scheme 2
Three possible O2-coordination modes in Cu2O2-cores
Scheme 3
Scheme 3
Model of species 2, as 2a, used in this paper
Scheme 4
Scheme 4
Calculated isomers of 2a and connecting transition states (in dashed boxes) studied in this paper. Mulliken spin densities (in |e|) are given with each structure. Values in red and blue are for triplet and singlet electronic states of the reported structures, respectively.
Scheme 5
Scheme 5
Calculated relative energies ( ΔH(ΔG)[ΔGsolv] in kcal/mol) of various isomers of 2a and connecting transition states. Values in red and blue are for triplet and singlet electronic states of the reported structures, respectively.
Scheme 6
Scheme 6
Schematic presentation of located important reactants, intermediates, transition states and products of formate-assisted transmetalation in 2a by boronic acid and C-C bond cross-coupling reactions. For structures of the presented transition states see Figure 1. Full geometry parameters for all of these structures are given in the Supporting Information. Their important geometry parameters are given in Table 3.
Scheme 7
Scheme 7
Calculated potential energy surface of the formate-assisted transmetalation in 2a by boronic acid and the subsequent C-C bond cross-coupling reactions. Presented energies are Gibbs free energies in solution (in kcal/mol). For notation of the structures, see Scheme 5 and Figure 1.

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