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. 2013 May 15;29(10):1350-1.
doi: 10.1093/bioinformatics/btt138. Epub 2013 Apr 16.

Cytoscape app store

Samad Lotia  1 , Jason Montojo, Yue Dong, Gary D Bader, Alexander R Pico
Affiliations

Cytoscape app store

Samad Lotia et al. Bioinformatics. .

Abstract

Summary: Cytoscape is an open source software tool for biological network visualization and analysis, which can be extended with independently developed apps. We launched the Cytoscape App Store to highlight the important features that apps add to Cytoscape, enable researchers to find and install apps they need and help developers promote their apps.

Availability: The App Store is available at http://apps.cytoscape.org.

Contact: apico@gladstone.ucsf.edu.

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Figures

Fig. 1.
Fig. 1.
(A) The Cytoscape App Store main page, with three ways for discovering apps: Featured Apps, Categories and Search. (B) A Cytoscape app page, where users can learn about the app through screenshots, a description and tutorial and Web site links. Users can rate, review and perform one-click installation from their browser
See this image and copyright information in PMC

References

    1. Bindea G, et al. ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks. Bioinformatics. 2009;25:1091–1093. - PMC - PubMed
    1. Cline MS, et al. Integration of biological networks and gene expression data using Cytoscape. Nat. Protoc. 2007;2:2366–2382. - PMC - PubMed
    1. Shannon P, et al. Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res. 2003;13:2498–24504. - PMC - PubMed

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