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. 2013 Oct;200(1):222-228.
doi: 10.1111/nph.12363. Epub 2013 Jun 17.

In situ high-frequency observations of mycorrhizas

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Free article

In situ high-frequency observations of mycorrhizas

Michael F Allen et al. New Phytol. 2013 Oct.
Free article

Abstract

Understanding the temporal variation of soil and root dynamics is a major step towards determining net carbon in ecosystems. We describe the installation and structure of an in situ soil observatory and sensing network consisting of an automated minirhizotron with associated soil and atmospheric sensors. Ectomycorrhizal hyphae were digitized daily during 2011 in a Mediterranean climate, high-elevation coniferous forest. Hyphal length was high, but stable during winter in moist and cold soil. As soil began to warm and dry, simultaneous mortality and production indicating turnover followed precipitation events. Mortality continued through the dry season, although some hyphae persisted through the extremes. With autumn monsoons, rapid hyphal re-growth occurred following each event. Relative hyphal length is dependent upon soil temperature and moisture. Soil respiration is related to the daily change in hyphal production, but not hyphal mortality. Continuous sensor and observation systems can provide more accurate assessments of soil carbon dynamics.

Keywords: automated minirhizotron; carbon scaling; conifer forest; ectomycorrhiza; hyphae; production; soil sensor network; turnover.

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References

    1. Allen MF. 1993. Microbial and phosphate dynamics in a restored shrub steppe in Southwestern Wyoming. Restoration Ecology 1: 196-205.
    1. Allen MF, Swenson W, Querejeta JI, Egerton-Warburton LM, Treseder KK. 2003. Ecology of mycorrhizae: a conceptual framework for complex interactions among plants and fungi. Annual Review of Phytopathology 41: 271-303.
    1. Allen MF, Vargas R, Graham EA, Swenson W, Hamilton M, Taggart M, Harmon TC, Rat'Ko A, Rundel P, Fulkerson B et al. 2007. Soil sensor technology: life within a pixel. BioScience 57: 859-867.
    1. Birchfield S, Wells CE. Rootfly: software for minirhizotron image analysis. [WWW document] URL http://www.ces.clemson.edu/~stb/rootfly/.
    1. Coleman DC, Crossley DC Jr. 1996. Fundamentals of soil ecology. San Diego, CA, USA: Academic Press.

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