Cyclotides as grafting frameworks for protein engineering and drug design applications
- PMID: 23893608
- DOI: 10.1002/bip.22284
Cyclotides as grafting frameworks for protein engineering and drug design applications
Abstract
Cyclotides are a family of naturally occurring backbone-cyclized macrocyclic mini-proteins from plants that have a knotted trio of intramolecular disulfide bonds. Their structural features imbue cyclotides with extraordinary stability against degradation at elevated temperatures or in the presence of proteolytic enzymes. The plasticity of their intracysteine loop sequences is exemplified by the more than 250 natural cyclotides sequenced to date, and this tolerance to sequence variation, along with their diverse bioactivities, underpins the suitability of the cyclic cystine knot motif as a valuable drug design scaffold and research tool for protein engineering studies. Here, we review the recent literature on applications of cyclotides for the stabilization of peptide epitopes and related protein engineering studies. Possible future directions in this field are also described.
Keywords: cyclic peptide; cyclotides; kalata B1; structure; synthesis.
Copyright © 2013 Wiley Periodicals, Inc.
Similar articles
-
Potential therapeutic applications of the cyclotides and related cystine knot mini-proteins.Expert Opin Investig Drugs. 2007 May;16(5):595-604. doi: 10.1517/13543784.16.5.595. Expert Opin Investig Drugs. 2007. PMID: 17461734 Review.
-
Thermal, chemical, and enzymatic stability of the cyclotide kalata B1: the importance of the cyclic cystine knot.Biochemistry. 2004 May 25;43(20):5965-75. doi: 10.1021/bi049711q. Biochemistry. 2004. PMID: 15147180
-
The role of conserved Glu residue on cyclotide stability and activity: a structural and functional study of kalata B12, a naturally occurring Glu to Asp mutant.Biochemistry. 2011 May 17;50(19):4077-86. doi: 10.1021/bi2004153. Epub 2011 Apr 25. Biochemistry. 2011. PMID: 21466163
-
Oxidative folding of the cystine knot motif in cyclotide proteins.Protein Pept Lett. 2005 Feb;12(2):147-52. doi: 10.2174/0929866053005863. Protein Pept Lett. 2005. PMID: 15723640 Review.
-
Disulfide folding pathways of cystine knot proteins. Tying the knot within the circular backbone of the cyclotides.J Biol Chem. 2003 Feb 21;278(8):6314-22. doi: 10.1074/jbc.M210492200. Epub 2002 Dec 12. J Biol Chem. 2003. PMID: 12482862
Cited by
-
Two Blast-independent tools, CyPerl and CyExcel, for harvesting hundreds of novel cyclotides and analogues from plant genomes and protein databases.Planta. 2015 Apr;241(4):929-40. doi: 10.1007/s00425-014-2229-5. Epub 2014 Dec 21. Planta. 2015. PMID: 25528148
-
Dual-targeting anti-angiogenic cyclic peptides as potential drug leads for cancer therapy.Sci Rep. 2016 Oct 13;6:35347. doi: 10.1038/srep35347. Sci Rep. 2016. PMID: 27734947 Free PMC article.
-
On the Utility of Chemical Strategies to Improve Peptide Gut Stability.J Med Chem. 2022 Apr 28;65(8):6191-6206. doi: 10.1021/acs.jmedchem.2c00094. Epub 2022 Apr 14. J Med Chem. 2022. PMID: 35420805 Free PMC article.
-
Exploring a Structural Data Mining Approach to Design Linkers for Head-to-Tail Peptide Cyclization.J Chem Inf Model. 2023 Oct 23;63(20):6436-6450. doi: 10.1021/acs.jcim.3c00865. Epub 2023 Oct 12. J Chem Inf Model. 2023. PMID: 37827517 Free PMC article.
-
Development of Novel Melanocortin Receptor Agonists Based on the Cyclic Peptide Framework of Sunflower Trypsin Inhibitor-1.J Med Chem. 2018 Apr 26;61(8):3674-3684. doi: 10.1021/acs.jmedchem.8b00170. Epub 2018 Apr 11. J Med Chem. 2018. PMID: 29605997 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources