Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2013 Sep 9;69(36):7719-7731.
doi: 10.1016/j.tet.2013.04.127.

Condensation reactions of guanidines with bis-electrophiles: Formation of highly nitrogenous heterocycles

Affiliations

Condensation reactions of guanidines with bis-electrophiles: Formation of highly nitrogenous heterocycles

David M Arnold et al. Tetrahedron. .

Abstract

2-Amino-1,4-dihydropyrimidines were reacted with bis-electrophiles to produce novel fused bi-pyrimidine, pyrimido-aminotriazine, and pyrimido-sulfonamide scaffolds. In addition, a quinazoline library was constructed using a guanidine Atwal-Biginelli reaction with 1-(quinazolin-2-yl)guanidines. The product heterocycles have novel constitutions with high nitrogen atom counts and represent valuable additions to screening libraries for the discovery of new modulators of biological targets.

Keywords: Atwal-Biginelli reaction; Guanidines; Pyrimidines; Quinazolines; Screening library.

PubMed Disclaimer

Figures

Fig. 1
Fig. 1
The 4H-pyrimido[1,2-a]pyrimidine and imidazo[1,2-a]pyridine scaffolds 1 and 2, and selected biologically active derivatives.
Fig. 2
Fig. 2
X-ray structure of 38d (CCDC 932463).
Fig. 3
Fig. 3
X-ray structure of 44 (CCDC 935121). Due to static disorder in the ethyl ester group, the five ethyl hydrogen positions are uncertain and are therefore not shown.
Fig. 4
Fig. 4
HF-6-311G* structures of anti- (top) and syn- (bottom) 46.
Scheme 1
Scheme 1
Overview of heterocycles obtained by condensation of guanidines with bis-electrophiles.
Scheme 2
Scheme 2
Thiourea methylation followed by aminolysis of the thioimidate provides access to 2-aminodihydropyrimidines.
Scheme 3
Scheme 3
2-Step preparation of 2-aminopyrimidine 13•HCl from PMB-protected guanidine 11.
Scheme 4
Scheme 4
Preparation of 2-aminopyrimidines from guanidine hydrochloride.
Scheme 5
Scheme 5
Synthesis of 4H-pyrimido[1,2-a]pyrimidine-3-carboxylates
Scheme 6
Scheme 6
Synthesis of 8-heteroaryl-4H-pyrimido[1,2-a]pyrimidine-3-carboxylates.
Scheme 7
Scheme 7
One-pot Sonogashira coupling - cyclocondensation for the synthesis of 8-aryl-4H-pyrimido[1,2-a]pyrimidine-3-carboxylates.
Scheme 8
Scheme 8
Synthesis of 2-morpholino-6H-pyrimido[1,2-a][1,3,5]triazine-7-carboxylates 40-43 and 4-oxo-3,4,6,9-tetrahydropyrimido[2,1-c][1,2,4,6]thiatriazine-7-carboxylate 2,2-dioxides 44-45.
Scheme 9
Scheme 9
A second Atwal-Biginelli cyclocondensation reaction converts 2-aminopyrimidine 13•TFA into pyrimidopyrimidine 46.
Scheme 10
Scheme 10
Atwal-Biginelli cyclocondensation reactions with guanidine-quinazolines 47a-d.

References

    1. Nielsen TE, Schreiber SL. Angew Chem Int Ed. 2008;47:48–56. - PMC - PubMed
    2. Arya P, Joseph R, Gan Z, Rakic B. Chem Biol. 2005;12:163–180. - PubMed
    3. Tan DS. Nat Chem Biol. 2005;1:74–84. - PubMed
    1. Wipf P. DOS. 2012:6–10.
    2. Huryn DM, Brodsky JL, Brummond KM, Chambers PG, Eyer B, Ireland AW, Kawasumi M, LaPorte MG, Lloyd K, Manteau B, Nghiem P, Quade B, Seguin SP, Wipf P. Proc Nat Acad Sci USA. 2011;108:6757–6762. - PMC - PubMed
    3. Zaware N, LaPorte MG, Farid R, Liu L, Wipf P, Floreancig PE. Molecules. 2011;16:3648–3662. - PMC - PubMed
    4. Hammill JT, Contreras-Garcia J, Virshup AM, Beratan DN, Yang W, Wipf P. Tetrahedron. 2010;66:5852–5862. - PMC - PubMed
    5. Wipf P, Stephenson CRJ, Walczak MAA. Org Lett. 2004;6:3009–3012. - PubMed
    1. Kim Y-K, Arai MA, Arai T, Lamenzo JO, Dean EF, Patterson N, Clemons PA, Schreiber SL. J Am Chem Soc. 2004;126:14740–14745. - PubMed
    1. Wipf P, Fang Z, Ferrié L, Ueda M, Walczak MAA, Yan Y, Yang M. Pure Appl Chem. 2013;85 in press. http://dx.doi.org/10.1351/PAC-CON-12-09-03. - DOI
    1. Macarron R, Banks MN, Bojanic D, Burns DJ, Cirovic DA, Garyantes T, Green DVS, Hertzberg RP, Janzen WP, Paslay JW, Schopfer U, Sittampalam GS. Nat Rev Drug Discov. 2011;10:188–195. - PubMed
    2. Haggarty SJ. Curr Opin Chem Biol. 2005;9:296–303. - PubMed

LinkOut - more resources