Methods to quantify microRNAs in the Myc gene network for posttranscriptional gene repression
- PMID: 24006063
- PMCID: PMC4053197
- DOI: 10.1007/978-1-62703-429-6_10
Methods to quantify microRNAs in the Myc gene network for posttranscriptional gene repression
Abstract
As a global transcription factor, Myc regulates both protein-coding genes and noncoding microRNA genes. Myc-activated or repressed miRNAs are involved in various pathways to affect tumorigenesis, mediate apoptosis, proliferation, angiogenesis, metastasis, and metabolism downstream of Myc. Functional characterization of miRNAs in the Myc network requires the accurate detection and quantification of miRNA expression levels. Here, we describe two widely used methodologies to determine miRNA expression, including miRNA real-time PCR and miRNA northern analysis.
Figures
Similar articles
-
Identification and analysis of the regulatory network of Myc and microRNAs from high-throughput experimental data.Comput Biol Med. 2013 Sep;43(9):1252-60. doi: 10.1016/j.compbiomed.2013.06.002. Epub 2013 Jun 13. Comput Biol Med. 2013. PMID: 23930820
-
Lin-28B transactivation is necessary for Myc-mediated let-7 repression and proliferation.Proc Natl Acad Sci U S A. 2009 Mar 3;106(9):3384-9. doi: 10.1073/pnas.0808300106. Epub 2009 Feb 11. Proc Natl Acad Sci U S A. 2009. PMID: 19211792 Free PMC article.
-
MicroRNAs as regulators and mediators of c-MYC function.Biochim Biophys Acta. 2015 May;1849(5):544-53. doi: 10.1016/j.bbagrm.2014.04.003. Epub 2014 Apr 13. Biochim Biophys Acta. 2015. PMID: 24727092 Review.
-
Widespread microRNA repression by Myc contributes to tumorigenesis.Nat Genet. 2008 Jan;40(1):43-50. doi: 10.1038/ng.2007.30. Epub 2007 Dec 9. Nat Genet. 2008. PMID: 18066065 Free PMC article.
-
Intricate crosstalk between MYC and non-coding RNAs regulates hallmarks of cancer.Mol Oncol. 2019 Jan;13(1):26-45. doi: 10.1002/1878-0261.12409. Epub 2018 Dec 5. Mol Oncol. 2019. PMID: 30451365 Free PMC article. Review.
Cited by
-
Suppression of Pepper mild mottle virus (PMMoV) by Modified Whey Proteins.Life (Basel). 2022 Jul 30;12(8):1165. doi: 10.3390/life12081165. Life (Basel). 2022. PMID: 36013344 Free PMC article.
-
The Quest for Targets Executing MYC-Dependent Cell Transformation.Front Oncol. 2016 Jun 2;6:132. doi: 10.3389/fonc.2016.00132. eCollection 2016. Front Oncol. 2016. PMID: 27313991 Free PMC article. Review.
References
-
- Meyer N, Penn LZ. Reflecting on 25 years with MYC. Nat Rev Cancer. 2008;8:976–990. - PubMed
-
- Nilsson JA, Cleveland JL. Myc pathways provoking cell suicide and cancer. Oncogene. 2003;22:9007–9021. - PubMed
-
- Bartel DP. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell. 2004;116:281–297. - PubMed
-
- He L, Hannon GJ. MicroRNAs: small RNAs with a big role in gene regulation. Nat Rev Genet. 2004;5:522–531. - PubMed
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Other Literature Sources
Research Materials