Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2013 Nov:236:89-94.
doi: 10.1016/j.jmr.2013.09.001. Epub 2013 Sep 13.

Long-observation-window band-selective homonuclear decoupling: increased sensitivity and resolution in solid-state NMR spectroscopy of proteins

Affiliations

Long-observation-window band-selective homonuclear decoupling: increased sensitivity and resolution in solid-state NMR spectroscopy of proteins

Jochem O Struppe et al. J Magn Reson. 2013 Nov.

Abstract

Sensitivity and resolution are the two fundamental obstacles to extending solid-state nuclear magnetic resonance to even larger protein systems. Here, a novel long-observation-window band-selective homonuclear decoupling (LOW BASHD) scheme is introduced that increases resolution up to a factor of 3 and sensitivity up to 1.8 by decoupling backbone alpha-carbon (C(α)) and carbonyl (C') nuclei in U-(13)C-labeled proteins during direct (13)C acquisition. This approach introduces short (<200 μs) pulse breaks into much longer (~8 ms) sampling windows to efficiently refocus the J-coupling interaction during detection while avoiding the deleterious effects on sensitivity inherent in rapid stroboscopic band-selective homonuclear decoupling techniques. A significant advantage of LOW-BASHD detection is that it can be directly incorporated into existing correlation methods, as illustrated here for 2D CACO, NCO, and NCA correlation spectroscopy applied to the β1 immunoglobulin binding domain of protein G and 3D CBCACO correlation spectroscopy applied to the α-subunit of tryptophan synthase.

Keywords: Band-selective homonuclear decoupling; Correlation spectroscopy; Increased resolution; Increased sensitivity; Protein solid-state NMR.

PubMed Disclaimer

Figures

Figure 1
Figure 1
Detection scheme for long-observation window band-selective homonuclear decoupling (LOW BASHD) in which evolution under the J-coupling interaction between detect and partner spins (shown here as C′ and Cα, respectively) is refocused at multiples of the decoupling period (τdec) by the application of short, selective τ pulses on the decoupled partner.
Figure 2
Figure 2
CP-MAS spectrum of U-13C,15N-glycine acquired with standard (right) and LOW-BASHD (left) detection. Partial evolution under the J-coupling interaction during the long refocusing periods leads to the decoupling sidebands observed in the LOW BASHD spectrum.
Figure 3
Figure 3
LOW-BASHD detected CP-MAS spectrum of U-13C,15N-glycine acquired with varying refocusing periods, τdec. As the refocusing periods become shorter, the decoupling sidebands become less intense and push further out. At the same time, the more frequent application of refocusing pulses leads to intensity loss due to lower duty-cycle detection and the accumulation of off-resonance pulse effects. Under these experimental conditions, the optimum balance between these two effects is found at τdec=8 ms.
Figure 4
Figure 4
The LOW-BASHD filter. (a) The FID and (b) corresponding spectrum of U-13C,15N-glycine acquired under LOW-BASHD detection using the crevasse method. (c) The time-domain signal for a constant DC voltage input (the DC offset of the receiver) digitized under LOW-BASHD and (d) standard detection. (e) The LOW-BASHD filter is the quotient of (d) and (c) (with the initial group delay period set to 1) and multiplies (a) to give the frequency-domain-deconvoluted (f) FID and (g) spectrum.
Figure 5
Figure 5
Comparisons of LOW-BASHD (left) and standard (right) detection for multidimensional solid-state NMR correlation spectroscopy. (a) The CTUC CACO correlation spectrum of GB1 shows increased sensitivity and resolution for LOW BASHD detection on C′, while (b) the NCA correlation spectrum of GB1 shows increased sensitivity at glycine residues and improved resolution at all residues using LOW BASHD detection on Cα. (c) The alanine region of the constant-time, J-MAS 3D CBCACO correlation spectrum of α-TS shows increased sensitivity and resolution for LOW-BASHD detection on C′.

References

    1. Chevelkov V, Chen ZJ, Bermel W, Reif B. Resolution enhancement in MAS solid-state NMR by application of C-13 homonuclear scalar decoupling during acquisition. Journal of Magnetic Resonance. 2005;172:56–62. - PubMed
    1. Verel R, Manolikas T, Siemer AB, Meier BH. Improved resolution in C-13 solid-state spectra through spin-state-selection. Journal of Magnetic Resonance. 2007;184:322–329. - PubMed
    1. Laage S, Lesage A, Emsley L, Bertini I, Felli IC, Pierattelli R, Pintacuda G. Transverse-Dephasing Optimized Homonuclear J-Decoupling in Solid-State NMR Spectroscopy of Uniformly 13C-Labeled Proteins. Journal of the American Chemical Society. 2009;131:10816–10817. - PubMed
    1. Igumenova TI, McDermott AE. Homo-nuclear C-13 J-decoupling in uniformly C-13-enriched solid proteins. Journal of Magnetic Resonance. 2005;175:11–20. - PubMed
    1. Shi LC, Peng XH, Ahmed MAM, Edwards D, Brown LS, Ladizhansky V. Resolution enhancement by homonuclear J-decoupling: application to three-dimensional solid-state magic angle spinning NMR spectroscopy. Journal of Biomolecular Nmr. 2008;41:9–15. - PubMed

Publication types

MeSH terms

LinkOut - more resources