Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
Review
. 2014 Feb;41(2):443-50.
doi: 10.1007/s10295-013-1368-1. Epub 2013 Oct 31.

Bioinformatics tools for genome mining of polyketide and non-ribosomal peptides

Affiliations
Review

Bioinformatics tools for genome mining of polyketide and non-ribosomal peptides

Christopher N Boddy. J Ind Microbiol Biotechnol. 2014 Feb.

Abstract

Microbial natural products have played a key role in the development of clinical agents in nearly all therapeutic areas. Recent advances in genome sequencing have revealed that there is an incredible wealth of new polyketide and non-ribosomal peptide natural product diversity to be mined from genetic data. The diversity and complexity of polyketide and non-ribosomal peptide biosynthesis has required the development of unique bioinformatics tools to identify, annotate, and predict the structures of these natural products from their biosynthetic gene clusters. This review highlights and evaluates web-based bioinformatics tools currently available to the natural product community for genome mining to discover new polyketides and non-ribosomal peptides.

PubMed Disclaimer

References

    1. Fungal Genet Biol. 2010 Sep;47(9):736-41 - PubMed
    1. PLoS One. 2012;7(3):e34064 - PubMed
    1. Proc Natl Acad Sci U S A. 2004 Nov 16;101(46):16222-7 - PubMed
    1. Mol Biol Evol. 2005 Oct;22(10):2027-39 - PubMed
    1. Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W465-9 - PubMed

MeSH terms

LinkOut - more resources