Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2013 Dec 31;8(12):e82964.
doi: 10.1371/journal.pone.0082964. eCollection 2013.

Uncovering and testing the fuzzy clusters based on lumped Markov chain in complex network

Affiliations

Uncovering and testing the fuzzy clusters based on lumped Markov chain in complex network

Fan Jing et al. PLoS One. .

Erratum in

  • PLoS One. 2014;9(4):e94154

Abstract

Identifying clusters, namely groups of nodes with comparatively strong internal connectivity, is a fundamental task for deeply understanding the structure and function of a network. By means of a lumped Markov chain model of a random walker, we propose two novel ways of inferring the lumped markov transition matrix. Furthermore, some useful results are proposed based on the analysis of the properties of the lumped Markov process. To find the best partition of complex networks, a novel framework including two algorithms for network partition based on the optimal lumped Markovian dynamics is derived to solve this problem. The algorithms are constructed to minimize the objective function under this framework. It is demonstrated by the simulation experiments that our algorithms can efficiently determine the probabilities with which a node belongs to different clusters during the learning process and naturally supports the fuzzy partition. Moreover, they are successfully applied to real-world network, including the social interactions between members of a karate club.

PubMed Disclaimer

Conflict of interest statement

Competing Interests: The authors have declared that no competing interests exist.

Figures

Figure 1
Figure 1. Lumped markov process of a network.
For a given partition formula image on a network formula image, we define a lumped network formula image by aggregating all nodes belonging to a subset formula image into a meta-node. The new weights formula image are computed via weight averaging the transition probabilities between nodes formula image and formula imageformula image, and the lumped Markov chain with transition probabilities formula image can also be obtained.
Figure 2
Figure 2. The pdf of and for the given ad hoc network with 128 nodes and .
The solid lines and dashed lines represent the pdf of formula image and formula image respectively. In each figure, the lower peak corresponds to the nodes in this cluster, and the higher peak corresponds to the other nodes outside of this cluster.
Figure 3
Figure 3. The convergence history of the objective function during 5–30 iterations of the karate club network.
Figure 4
Figure 4. The visualization of the partitioning results of the karete club network.
(a)Hard partition with thresholding operation according to the node's maximal weight. (b)Hard partition by k-means in ; (c)Fuzzy partition by CGP2.

Similar articles

References

    1. Lancichinetti A, Kivelä M, Saramäki J, Fortunato S (2010) Characterizing the community structure of complex networks. PloS one 5: e11976. - PMC - PubMed
    1. Albert R, Barabási AL (2002) Statistical mechanics of complex networks. Reviews of modern physics 74: 47.
    1. Newman M, Barabási AL, Watts DJ (2006) The structure and dynamics of networks. Princeton University Press.
    1. Börner K, Sanyal S, Vespignani A (2007) Network science. Annual review of information science and technology 41: 537–607.
    1. Shi J, Malik J (2000) Normalized cuts and image segmentation. Pattern Analysis and Machine Intelligence, IEEE Transactions on 22: 888–905.

Publication types

LinkOut - more resources