Computational replication of the abnormal secondary kinetic isotope effects in a hydride transfer reaction in solution with a motion assisted H-tunneling model
- PMID: 24498946
- PMCID: PMC3985929
- DOI: 10.1021/jo402650a
Computational replication of the abnormal secondary kinetic isotope effects in a hydride transfer reaction in solution with a motion assisted H-tunneling model
Abstract
We recently reported abnormal secondary deuterium kinetic isotope effects (2° KIEs) for hydride transfer reactions from alcohols to carbocations in acetonitrile (Chem. Comm. 2012, 48, 11337). Experimental 2° KIE values were found to be inflated on the 9-C position in the xanthylium cation but deflated on the β-C position in 2-propanol with respect to the values predicted by the semi-classical transition-state theory. No primary (1°) isotope effect on 2° KIEs was observed. Herein, the KIEs were replicated by the Marcus-like H-tunneling model that requires a longer donor-acceptor distance (DAD) in a lighter isotope transfer process. The 2° KIEs for a range of potential tunneling-ready-states (TRSs) of different DADs were calculated and fitted to the experiments to find the TRS structure. The observed no effect of 1° isotope on 2° KIEs is explained in terms of the less sterically hindered TRS structure so that the change in DAD due to the change in 1° isotope does not significantly affect the reorganization of the 2° isotope and hence the 2° KIE. The effect of 1° isotope on 2° KIEs may be expected to be more pronounced and thus observable in reactions occurring in restrictive environments such as the crowded and relatively rigid active site of enzymes.
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References
-
- More O’Ferrall R. A. J. Phy. Org. Chem. 2010, 23, 559.
-
- Bell R. P.The Tunnel Effect in Chemistry; Chapman & Hall: London, New York, 1980.
-
- Kohen A.; Cannio R.; Bartolucci S.; Klinman J. P. Nature 1999, 399, 496. - PubMed
-
- Basran J.; Sutcliffe M. J.; Scrutton N. S. Biochemistry 1999, 38, 3218. - PubMed
-
- Harris R. J.; Meskys R.; Sutcliffe M. J.; Scrutton N. S. Biochemistry 2000, 39, 1189. - PubMed
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