Refining the structure and content of clinical genomic reports
- PMID: 24616401
- PMCID: PMC4077592
- DOI: 10.1002/ajmg.c.31395
Refining the structure and content of clinical genomic reports
Abstract
To effectively articulate the results of exome and genome sequencing we refined the structure and content of molecular test reports. To communicate results of a randomized control trial aimed at the evaluation of exome sequencing for clinical medicine, we developed a structured narrative report. With feedback from genetics and non-genetics professionals, we developed separate indication-specific and incidental findings reports. Standard test report elements were supplemented with research study-specific language, which highlighted the limitations of exome sequencing and provided detailed, structured results, and interpretations. The report format we developed to communicate research results can easily be transformed for clinical use by removal of research-specific statements and disclaimers. The development of clinical reports for exome sequencing has shown that accurate and open communication between the clinician and laboratory is ideally an ongoing process to address the increasing complexity of molecular genetic testing.
Keywords: Clinical Laboratory Improvement Amendments (CLIA); College of American Pathologists (CAP); exome sequencing; incidental findings; laboratory report.
© 2014 Wiley Periodicals, Inc.
Conflict of interest statement
Conflict of interest: none.
References
-
- American College of Medical Genetics. Standards and guidelines for clinical genetics laboratories. ARTICLE AMERICAN JOURNAL OF MEDICAL GENETICS PART C (SEMINARS IN MEDICAL GENETICS) 2008:91.
-
- Berg RS, Amendola LM, Eng C, Van Allen E, Gray SW, Wagle N, Rehm HL, DeChene ET, Dulik MC, Hisama FM, Burke W, Spinner NB, Garraway L, Green RC, Plon S, Evans JP, Jarvik GP Members of the CSER Actionability and Return of Results Working Group. Processes and preliminary outputs for identification of actionable genes as incidental findings in genomic sequence data in the Clinical Sequencing Research Consortium. Genet Med. 2013;15:860–867. - PMC - PubMed
-
- Centers for Medicare & Medicaid Services. EHR incentive programs. 2013 http://www.cms.gov/EHRIncentivePrograms/ - PubMed
-
- Centers for Medicare & Medicaid Services. Clinical Laboratory Improvement Amendments. (Section 42 CFR §493. 1291). http://www.cms.gov/Regulations-and-Guidance/Legislation/CLIA/index.html?...
-
- Chen B, Gagnon M, Shahangian S, Anderson NL, Howerton DA, Boone JD Centers for Disease Control and Prevention (CDC) Good laboratory practices for molecular genetic testing for heritable diseases and conditions. MMWR Recomm Rep. 2009;58:1–37. - PubMed
Publication types
MeSH terms
Grants and funding
LinkOut - more resources
Full Text Sources
Other Literature Sources
Miscellaneous