Duplication of the tuf gene: a new insight into the phylogeny of eubacteria
- PMID: 2492503
- PMCID: PMC209627
- DOI: 10.1128/jb.171.1.581-584.1989
Duplication of the tuf gene: a new insight into the phylogeny of eubacteria
Abstract
The conservation and duplication of the tuf gene encoding the elongation factor EF-Tu were used to define phylogenetic relationships among eubacteria. When the tufA gene of Escherichia coli was used as a probe in hybridization experiments, duplicate tuf genes were found in gram-negative bacteria from three major phyla: purple bacteria, bacteroides, and cyanobacteria. Only a single copy of tuf was found in gram-positive bacteria, including mycobacteria and mycoplasmas. Gram-positive clostridia were found to carry two copies of tuf.
Similar articles
-
Evolution of tuf genes: ancient duplication, differential loss and gene conversion.FEBS Lett. 2001 Aug 3;502(3):113-6. doi: 10.1016/s0014-5793(01)02639-4. FEBS Lett. 2001. PMID: 11583110
-
Functional Constraints on Replacing an Essential Gene with Its Ancient and Modern Homologs.mBio. 2017 Aug 29;8(4):e01276-17. doi: 10.1128/mBio.01276-17. mBio. 2017. PMID: 28851849 Free PMC article.
-
Evidence for horizontal gene transfer in evolution of elongation factor Tu in enterococci.J Bacteriol. 2000 Dec;182(24):6913-20. doi: 10.1128/JB.182.24.6913-6920.2000. J Bacteriol. 2000. PMID: 11092850 Free PMC article.
-
Sequence and identification of the nucleotide binding site for the elongation factor Tu from Thermus thermophilus HB8.Nucleic Acids Res. 1987 Nov 25;15(22):9263-77. doi: 10.1093/nar/15.22.9263. Nucleic Acids Res. 1987. PMID: 3317278 Free PMC article.
-
Molecular phylogeny of Eubacteria: a new multiple tree analysis method applied to 15 sequence data sets questions the monophyly of gram-positive bacteria.Res Microbiol. 1994 Sep;145(7):531-41. doi: 10.1016/0923-2508(94)90030-2. Res Microbiol. 1994. PMID: 7855439 Review.
Cited by
-
Monoclonal antibodies specific for elongation factor Tu and complete nucleotide sequence of the tuf gene in Mycobacterium tuberculosis.Infect Immun. 1992 Aug;60(8):3136-42. doi: 10.1128/iai.60.8.3136-3142.1992. Infect Immun. 1992. PMID: 1639483 Free PMC article.
-
Expression of duplicate msa genes in the salmonid pathogen Renibacterium salmoninarum.Appl Environ Microbiol. 2002 Nov;68(11):5480-7. doi: 10.1128/AEM.68.11.5480-5487.2002. Appl Environ Microbiol. 2002. PMID: 12406741 Free PMC article.
-
Colostrum of healthy Slovenian mothers: microbiota composition and bacteriocin gene prevalence.PLoS One. 2015 Apr 28;10(4):e0123324. doi: 10.1371/journal.pone.0123324. eCollection 2014. PLoS One. 2015. PMID: 25919457 Free PMC article.
-
Genome organization of the anaerobic pathogen Clostridium perfringens.Proc Natl Acad Sci U S A. 1989 Sep;86(17):6676-80. doi: 10.1073/pnas.86.17.6676. Proc Natl Acad Sci U S A. 1989. PMID: 2549543 Free PMC article.
-
A chimeric disposition of the elongation factor genes in Rickettsia prowazekii.J Bacteriol. 1996 Nov;178(21):6192-9. doi: 10.1128/jb.178.21.6192-6199.1996. J Bacteriol. 1996. PMID: 8892818 Free PMC article.
References
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases