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Review
. 2014 Jul 1:107:31.1.1-31.1.17.
doi: 10.1002/0471142727.mb3101s107.

CRISPR/Cas9-Directed Genome Editing of Cultured Cells

Affiliations
Review

CRISPR/Cas9-Directed Genome Editing of Cultured Cells

Luhan Yang et al. Curr Protoc Mol Biol. .

Abstract

Human genome engineering has been transformed by the introduction of the CRISPR (clustered regularly interspaced short palindromic repeats)/Cas (CRISPR-associated) system found in most bacteria and archaea. Type II CRISPR/Cas systems have been engineered to induce RNA-guided genome editing in human cells, where small RNAs function together with Cas9 nucleases for sequence-specific cleavage of target sequences. Here we describe the protocol for Cas9-mediated human genome engineering, including construct building and transfection methods necessary for delivering Cas9 and guide RNA (gRNA) into human-induced pluripotent stem cells (hiPSCs) and HEK293 cells. Following genome editing, we also describe methods to assess genome editing efficiency using next-generation sequencing and isolate monoclonal hiPSCs with the desired modifications for downstream applications.

Keywords: CRISPR; genome engineering; human stem cells.

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References

Literature Cited

    1. Bhaya, D. , Davison, M. , and Barrangou, R. 2011. CRISPR-Cas systems in bacteria and archaea: Versatile small RNAs for adaptive defense and regulation. Annu. Rev. Genetics 45:273-297.
    1. Brouns, S.J.J. , Jore, M.M. , Lundgren, M. , Westra, E.R. , Slijkhuis, R.J.H. , Snijders, A.P.L. , Dickman, M.J. , Makarova, K.S. , Koonin, E.V. , and van der Oost, J. 2008. Small CRISPR RNAs guide antiviral defense in prokaryotes. Science 321:960-964.
    1. Carte, J. , Wang, R. , Li, H. , Terns, R.M. , and Terns, M. P. 2008. Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes. Genes Dev. 22:3489-3496.
    1. Chen, F. , Pruett-Miller, S.M. , Huang, Y. , Gjoka, M. , Duda, K. , Taunton, J. , Collingwood, T.N. , Frodin, M. , and Davis, G.D. 2011. High-frequency genome editing using ssDNA oligonucleotides with zinc-finger nucleases. Nat. Methods 8:753-755.
    1. Cho, S. W. , Kim, S. , Kim, J. M. , and Kim, J.-S. 2013. Targeted genome engineering in human cells with the Cas9 RNA-guided endonuclease. Nat. Biotechnol. 31:230-232.

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