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. 2014 Jul 22;111(29):10462-7.
doi: 10.1073/pnas.1406967111. Epub 2014 Jul 7.

Testing for memory-free spectroscopic coordinates by 3D IR exchange spectroscopy

Affiliations

Testing for memory-free spectroscopic coordinates by 3D IR exchange spectroscopy

Joanna A Borek et al. Proc Natl Acad Sci U S A. .

Abstract

Using 3D infrared (IR) exchange spectroscopy, the ultrafast hydrogen-bond forming and breaking (i.e., complexation) kinetics of phenol to benzene in a benzene/CCl4 mixture is investigated. By introducing a third time point at which the hydrogen-bonding state of phenol is measured (in comparison with 2D IR exchange spectroscopy), the spectroscopic method can serve as a critical test of whether the spectroscopic coordinate used to observe the exchange process is a memory-free, or Markovian, coordinate. For the system under investigation, the 3D IR results suggest that this is not the case. This conclusion is reconfirmed by accompanying molecular dynamics simulations, which furthermore reveal that the non-Markovian kinetics is caused by the heterogeneous structure of the mixed solvent.

Keywords: 3D IR spectroscopy; solvent dynamics; ultrafast dynamics.

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Conflict of interest statement

The authors declare no conflict of interest.

Figures

Fig. 1.
Fig. 1.
Sketch of (A) diagonal- and cross-peaks in a 2D IR exchange experiment. At short waiting time t, only diagonal peaks (CC and FF) are present. Upon increasing t, cross-peaks CF and FC emerge. (B) Diagonal- and cross-peaks in a 3D IR exchange experiment. At short t1 and t2 population times only two diagonal peaks corresponding to unchanged species C and F are present (CCC and FFF). Upon increasing t1 and/or t2, cross-peaks emerge (CCF, FFC, FCC, CFF, CFC, and FCF). The dotted lines show the projections of the 3D IR peaks onto the ω12, ω13, and ω23 planes.
Fig. 2.
Fig. 2.
Absorption spectrum of deuterated phenol in a mixed benzene–CCl4 solvent with two peaks: the OD-stretch vibration of a phenol-OD–benzene complex at 2,631 cm−1 (ωC) and that of free phenol-OD at 2,666 cm−1 (ωF).
Fig. 3.
Fig. 3.
3D IR spectra of phenol–benzene complexation at various population times (t1, t2). The (0.1, 0.1)-ps spectrum is shown fully in 3D, the other spectra only as projections onto the ω12, ω23, and ω13 planes. Experimental data are shown in red, fits to the data in black. Emerging cross-peaks are assigned.
Fig. 4.
Fig. 4.
Correlation function as defined in Eq. 4 (black squares), together with an exponential (blue line) and a stretched exponential fit (red line).
Fig. 5.
Fig. 5.
Three-time-point joint probability functions pCCC, pFCC, and pCCF deduced from (A) the MD simulation and (B) the two-state model which uses parameters deduced from 2D IR spectroscopy (11). Contour lines are in steps of 5% of the peak signal of pCCC.
Fig. 6.
Fig. 6.
Ratios pCCF/pCCC and pFCC/pCCC for (A) experimental 3D IR data, (B) MD simulation, and (C) two-state model. Contour lines are in steps of 0.05 and are the same for all three plots. The dots in A (Insets) mark the positions where 3D IR spectra have been taken. Ratios pFCC/pCCC and pCCF/pCCC along t2 and t1, respectively, with the corresponding other time coordinate fixed to 3.0 ps.

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