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Review
. 2015 Jan 20:84:1.28.1-1.28.9.
doi: 10.1002/0471142905.hg0128s84.

Statistical methods for genome-wide and sequencing association studies of complex traits in related samples

Affiliations
Review

Statistical methods for genome-wide and sequencing association studies of complex traits in related samples

Timothy A Thornton. Curr Protoc Hum Genet. .

Abstract

Genome-wide association studies (GWAS) and sequencing studies are routinely conducted for the identification of genetic variants that are associated with complex traits. Many genetic studies for association mapping include related individuals. When relatives are included in an association analysis, familial correlations must be appropriately taken into account to ensure correct type I error and to increase power. This unit provides an overview of statistical methods that are available for GWAS and sequencing association studies of complex traits in samples with related individuals.

Keywords: GWAS; association mapping; complex traits; family data; genome-wide association studies; mixed models; relatedness; sequence.

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References

    1. Abecasis GR, Cardon LR, Cookson WO. A general test of association for quantitative traits in nuclear families. Am J Hum Genet. 2000;66:279–292. - PMC - PubMed
    1. Abney M, Ober C, McPeek MS. Quantitative- trait homozygosity and association mapping and empirical ge- nomewide significance in large, complex pedigrees: fasting serum-insulin level in the Hutterites. Am J Hum Genet. 2002;70:920–934. - PMC - PubMed
    1. Browning SR, Briley JD, Briley LP, Chandra G, Charnecki JH, et al. Case-control single-marker and haplotypic association analysis of pedigree data. Genet Epidemiol. 2005;28:110–122. - PubMed
    1. Chen H, Meigs JB, Dupuis J. Sequence kernel association test for quantitative traits in family samples. Genet Epidemiol. 2013;37:196–204. - PMC - PubMed
    1. Clayton D. Testing for association on the X chromosome. Biostatistics. 2008;9:593–600. - PMC - PubMed

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