Symbol Nomenclature for Graphical Representations of Glycans

Ajit Varki¹, Richard D Cummings², Markus Aebi³, Nicole H Packer⁴, Peter H Seeberger⁵, Jeffrey D Esko⁶, Pamela Stanley⁷, Gerald Hart⁸, Alan Darvill⁹, Taroh Kinoshita¹⁰, James J Prestegard⁹, Ronald L Schnaar⁸, Hudson H Freeze¹¹, Jamey D Marth¹², Carolyn R Bertozzi¹³, Marilynn E Etzler¹⁴, Martin Frank¹⁵, Johannes Fg Vliegenthart¹⁶, Thomas Lütteke¹⁷, Serge Perez¹⁸, Evan Bolton¹⁹, Pauline Rudd²⁰, James Paulson²¹, Minoru Kanehisa²², Philip Toukach²³, Kiyoko F Aoki-Kinoshita²⁴, Anne Dell²⁵, Hisashi Narimatsu²⁶, William York²⁷, Naoyuki Taniguchi²⁸, Stuart Kornfeld²⁹

Affiliations

¹ Editor, Third Edition of Essentials of Glycobiology Glycan Symbol Nomenclature Discussion Group, 2014-2015 UC San Diego, La Jolla, CA, USA.
² Editor, Third Edition of Essentials of Glycobiology Glycan Symbol Nomenclature Discussion Group, 2014-2015 Illustrations Editor, Essentials of Glycobiology Chair, Consortium for Functional Glycomics Harvard Medical School, Boston, MA, USA.
³ Editor, Third Edition of Essentials of Glycobiology Glycan Symbol Nomenclature Discussion Group, 2014-2015 ETH Zürich, Zürich, Switzerland.
⁴ Editor, Third Edition of Essentials of Glycobiology Glycan Symbol Nomenclature Discussion Group, 2014-2015 Macquarie University, Sydney, NSW, Australia.
⁵ Editor, Third Edition of Essentials of Glycobiology Glycan Symbol Nomenclature Discussion Group, 2014-2015 Max-Planck-Institute, Potsdam-Golm, Germany.
⁶ Editor, Third Edition of Essentials of Glycobiology UC San Diego, La Jolla, CA, USA.
⁷ Editor, Third Edition of Essentials of Glycobiology Albert Einstein College of Medicine, New York, NY, USA.
⁸ Editor, Third Edition of Essentials of Glycobiology Johns Hopkins University, Baltimore, MD, USA.
⁹ Editor, Third Edition of Essentials of Glycobiology University of Georgia, Athens, GA, USA.
¹⁰ Editor, Third Edition of Essentials of Glycobiology Osaka University, Osaka, Japan.
¹¹ Editor, earlier Edition of Essentials of Glycobiology Sanford-Burnham-Prebys Medical Discovery Institute, La Jolla, CA, USA.
¹² Editor, earlier Edition of Essentials of Glycobiology UC Santa Barbara, Santa Barbara, CA, USA.
¹³ Editor, earlier Edition of Essentials of Glycobiology Stanford University, Stanford, CA, USA.
¹⁴ Editor, earlier Edition of Essentials of Glycobiology UC Davis, Davis, CA, USA.
¹⁵ Glycan Symbol Nomenclature Discussion Group, 2014-2015 IUPAC Carbohydrate Nomenclature Committee Biognos AB, Gothenburg, Sweden.
¹⁶ Glycan Symbol Nomenclature Discussion Group, 2014-2015 IUPAC Carbohydrate Nomenclature Committee Utrecht University, Utrecht, Netherlands.
¹⁷ Glycan Symbol Nomenclature Discussion Group, 2014-2015 IUPAC Carbohydrate Nomenclature Committee Curator, MonosaccharideDB Justus-Liebig-University Giessen, Giessen, Germany.
¹⁸ Glycan Symbol Nomenclature Discussion Group, 2014-2015 Curator, Glycopedia CNRS-University Grenoble Alpes, Saint-Martin-d'Hères, France.
¹⁹ Glycan Symbol Nomenclature Discussion Group, 2014-2015 Lead Scientist, PubChem, National Center for Biotechnology Information National Library of Medicine, Bethesda, MD, USA.
²⁰ Oxford Glycobiology Institute National Institute for Bioprocessing, Research and Training, Dublin, Ireland.
²¹ Past Chair, Consortium for Functional Glycomics The Scripps Research Institute La Jolla, La Jolla, CA, USA.
²² Principal Investigator, KEGG Database Kyoto University, Kyoto, Japan.
²³ Glycan Symbol Nomenclature Discussion Group, 2014-2015 Curator, Carbohydrate Structure Database (CSDB) Zelinsky Institute of Organic Chemistry, Moscow, Russia.
²⁴ Lead Scientist, GlyTouCan Database Soka University, Tokyo, Japan.
²⁵ Imperial College, London, UK.
²⁶ National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan.
²⁷ University of Georgia, Athens, GA, USA.
²⁸ RIKEN, Saitama, Japan.
²⁹ Washington University School of Medicine, St. Louis, MO, USA.

PMID: 26543186
PMCID: PMC4643639
DOI: 10.1093/glycob/cwv091

Symbol Nomenclature for Graphical Representations of Glycans

Ajit Varki et al. Glycobiology. 2015 Dec.

. 2015 Dec;25(12):1323-4.

doi: 10.1093/glycob/cwv091.

Authors

Affiliations

¹ Editor, Third Edition of Essentials of Glycobiology Glycan Symbol Nomenclature Discussion Group, 2014-2015 UC San Diego, La Jolla, CA, USA.
² Editor, Third Edition of Essentials of Glycobiology Glycan Symbol Nomenclature Discussion Group, 2014-2015 Illustrations Editor, Essentials of Glycobiology Chair, Consortium for Functional Glycomics Harvard Medical School, Boston, MA, USA.
³ Editor, Third Edition of Essentials of Glycobiology Glycan Symbol Nomenclature Discussion Group, 2014-2015 ETH Zürich, Zürich, Switzerland.
⁴ Editor, Third Edition of Essentials of Glycobiology Glycan Symbol Nomenclature Discussion Group, 2014-2015 Macquarie University, Sydney, NSW, Australia.
⁵ Editor, Third Edition of Essentials of Glycobiology Glycan Symbol Nomenclature Discussion Group, 2014-2015 Max-Planck-Institute, Potsdam-Golm, Germany.
⁶ Editor, Third Edition of Essentials of Glycobiology UC San Diego, La Jolla, CA, USA.
⁷ Editor, Third Edition of Essentials of Glycobiology Albert Einstein College of Medicine, New York, NY, USA.
⁸ Editor, Third Edition of Essentials of Glycobiology Johns Hopkins University, Baltimore, MD, USA.
⁹ Editor, Third Edition of Essentials of Glycobiology University of Georgia, Athens, GA, USA.
¹⁰ Editor, Third Edition of Essentials of Glycobiology Osaka University, Osaka, Japan.
¹¹ Editor, earlier Edition of Essentials of Glycobiology Sanford-Burnham-Prebys Medical Discovery Institute, La Jolla, CA, USA.
¹² Editor, earlier Edition of Essentials of Glycobiology UC Santa Barbara, Santa Barbara, CA, USA.
¹³ Editor, earlier Edition of Essentials of Glycobiology Stanford University, Stanford, CA, USA.
¹⁴ Editor, earlier Edition of Essentials of Glycobiology UC Davis, Davis, CA, USA.
¹⁵ Glycan Symbol Nomenclature Discussion Group, 2014-2015 IUPAC Carbohydrate Nomenclature Committee Biognos AB, Gothenburg, Sweden.
¹⁶ Glycan Symbol Nomenclature Discussion Group, 2014-2015 IUPAC Carbohydrate Nomenclature Committee Utrecht University, Utrecht, Netherlands.
¹⁷ Glycan Symbol Nomenclature Discussion Group, 2014-2015 IUPAC Carbohydrate Nomenclature Committee Curator, MonosaccharideDB Justus-Liebig-University Giessen, Giessen, Germany.
¹⁸ Glycan Symbol Nomenclature Discussion Group, 2014-2015 Curator, Glycopedia CNRS-University Grenoble Alpes, Saint-Martin-d'Hères, France.
¹⁹ Glycan Symbol Nomenclature Discussion Group, 2014-2015 Lead Scientist, PubChem, National Center for Biotechnology Information National Library of Medicine, Bethesda, MD, USA.
²⁰ Oxford Glycobiology Institute National Institute for Bioprocessing, Research and Training, Dublin, Ireland.
²¹ Past Chair, Consortium for Functional Glycomics The Scripps Research Institute La Jolla, La Jolla, CA, USA.
²² Principal Investigator, KEGG Database Kyoto University, Kyoto, Japan.
²³ Glycan Symbol Nomenclature Discussion Group, 2014-2015 Curator, Carbohydrate Structure Database (CSDB) Zelinsky Institute of Organic Chemistry, Moscow, Russia.
²⁴ Lead Scientist, GlyTouCan Database Soka University, Tokyo, Japan.
²⁵ Imperial College, London, UK.
²⁶ National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan.
²⁷ University of Georgia, Athens, GA, USA.
²⁸ RIKEN, Saitama, Japan.
²⁹ Washington University School of Medicine, St. Louis, MO, USA.

PMID: 26543186
PMCID: PMC4643639
DOI: 10.1093/glycob/cwv091

No abstract available

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References

1. Chester MA. 1998. IUPAC-IUB Joint Commission on Biochemical Nomenclature (JCBN). Nomenclature of glycolipids—Recommendations 1997. Eur J Biochem. 257:293–298. - PubMed
1. Harvey DJ, Merry AH, Royle L, Campbell MP, Dwek RA, Rudd PM. 2009. Proposal for a standard system for drawing structural diagrams of N- and O-linked carbohydrates and related compounds. Proteomics. 9:3796–3801. - PubMed
1. Kornfeld S, Li E, Tabas I. 1978. The synthesis of complex-type oligosaccharides. II. Characterization of the processing intermediates in the synthesis of the complex oligosaccharide units of the vesicular stomatitis virus G protein. J Biol Chem. 253:7771–7778. - PubMed
1. McNaught AD. 1997. International Union of Pure and Applied Chemistry and International Union of Biochemistry and Molecular Biology. Joint Commission on Biochemical Nomenclature. Nomenclature of carbohydrates. Carbohydr Res. 297:1–92. - PubMed
1. Sharon N. 1986. IUPAC-IUB Joint Commission on Biochemical Nomenclature (JCBN). Nomenclature of glycoproteins, glycopeptides and peptidoglycans. Recommendations 1985. Eur J Biochem. 159:1–6. - PubMed

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Symbol Nomenclature for Graphical Representations of Glycans

Affiliations

Symbol Nomenclature for Graphical Representations of Glycans

Authors

Affiliations

References

MeSH terms

Substances

Grants and funding

LinkOut - more resources

Full Text Sources

Other Literature Sources