Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
Comparative Study
. 2015 Dec 23;11(12):851.
doi: 10.15252/msb.20156053.

The evolution of standards and data management practices in systems biology

Natalie J Stanford  1 , Katherine Wolstencroft  2 , Martin Golebiewski  3 , Renate Kania  3 , Nick Juty  4 , Christopher Tomlinson  5 , Stuart Owen  6 , Sarah Butcher  5 , Henning Hermjakob  4 , Nicolas Le Novère  7 , Wolfgang Mueller  3 , Jacky Snoep  8 , Carole Goble  6
Affiliations
Comparative Study

The evolution of standards and data management practices in systems biology

Natalie J Stanford et al. Mol Syst Biol. .

Abstract

A recent community survey conducted by Infrastructure for Systems Biology Europe (ISBE) informs requirements for developing an efficient infrastructure for systems biology standards, data and model management.

PubMed Disclaimer

Figures

Figure 1
Figure 1
Survey summary.
See this image and copyright information in PMC

References

    1. Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, Harris MA, Hill DP, Issel‐Tarver L, Kasarskis A, Lewis S, Matese JC, Richardson JE, Ringwald M, Rubin GM, Sherlock G (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25: 25–29 - PMC - PubMed
    1. Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C, Aach J, Ansorge W, Ball CA, Causton HC, Gaasterland T, Glenisson P, Holstege FC, Kim IF, Markowitz V, Matese JC, Parkinson H, Robinson A, Sarkans U, Schulze‐Kremer S et al (2001) Minimum information about a microarray experiment (MIAME)‐toward standards for microarray data. Nat Genet 29: 365–371 - PubMed
    1. Chelliah V, Juty N, Ajmera I, Raza A, Dumousseau M, Glont M, Hucka M, Jalowicki G, Keating S, Knight‐Schrijver V, Lloret‐Villas A, Natarajan K, Pettit J‐B, Rodriguez N, Schubert M, Wimalaratne S, Zhou Y, Hermjakob H, Le Novère N, Laibe C (2015) BioModels: ten year anniversary. Nucleic Acids Res 43: D542–D548 - PMC - PubMed
    1. Courtot M, Juty N, Knüpfer C, Waltemath D, Zhukova A, Dräger A, Dumontier M, Finney A, Golebiewski M, Hastings J, Hoops S, Keating S, Kell DB, Kerrien S, Lawson J, Lister A, Lu J, Machne R, Mendes P, Pocock M et al (2011) Controlled vocabularies and semantics in systems biology. Mol Syst Biol 7: 543 - PMC - PubMed
    1. Hastings J, de Matos P, Dekker A, Ennis M, Harsha B, Kale N, Muthukrishnan V, Owen G, Turner S, Williams M, Steinbeck C (2013) The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013. Nucleic Acids Res 41: D456–D463 - PMC - PubMed

Publication types