Detection of Influenza D Virus among Swine and Cattle, Italy

doi:10.3201/eid2202.151439

. 2016 Feb;22(2):352-4.

doi: 10.3201/eid2202.151439.

Detection of Influenza D Virus among Swine and Cattle, Italy

Chiara Chiapponi, Silvia Faccini, Aurora De Mattia, Laura Baioni, Ilaria Barbieri, Carlo Rosignoli, Arrigo Nigrelli, Emanuela Foni

PMID: 26812282
PMCID: PMC4734544
DOI: 10.3201/eid2202.151439

Detection of Influenza D Virus among Swine and Cattle, Italy

Chiara Chiapponi et al. Emerg Infect Dis. 2016 Feb.

. 2016 Feb;22(2):352-4.

doi: 10.3201/eid2202.151439.

Authors

Chiara Chiapponi, Silvia Faccini, Aurora De Mattia, Laura Baioni, Ilaria Barbieri, Carlo Rosignoli, Arrigo Nigrelli, Emanuela Foni

PMID: 26812282
PMCID: PMC4734544
DOI: 10.3201/eid2202.151439

No abstract available

Keywords: D/swine/Oklahoma/1334/2011; IDV; Influenza D virus; Italy; cattle; cows; genome; influenza; pigs; respiratory infections; swine; viruses; zoonoses.

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Figures

**Figure**
Phylogenetic trees of the 7 genes of influenza D viruses obtained from 1 sow and 2 cattle in Italy (vertical bars) and comparison isolates retrieved from GenBank. A) Polymerase basic (PB) 2: 2,319 nt; B) PB1: 1,434 nt; C) P3: 2,133 nt; D) glycoprotein hemagglutininesterase: 1,995 nt; E) nucleoprotein: 1,659 nt; F) polymerase 42: 1,164 nt; G) nonstructural: 732 nt. Genes were trimmed and aligned, then phylogenetically analyzed by using the maximum-likelihood method. Sequences are listed by their host, country, strain name, and collection year. Scale bars indicate nucleotide substitutions per site.

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References

1. Hause BM, Ducatez M, Collin EA, Ran Z, Liu R, Sheng Z, et al. Isolation of a novel swine influenza virus from Oklahoma in 2011 which is distantly related to human influenza C viruses. PLoS Pathog. 2013;9:e1003176. 10.1371/journal.ppat.1003176 - DOI - PMC - PubMed
1. Ducatez MF, Pelletier C, Meyer G. Influenza D virus in cattle, France, 2011–2014. Emerg Infect Dis. 2015;21:368–71 . - PMC - PubMed
1. Hause BM, Collin EA, Liu R, Huang B, Sheng Z, Lu W, et al. Characterization of a novel influenza virus in cattle and swine: proposal for a new genus in the Orthomyxoviridae family. MBio. 2014;5:e00031–14. 10.1128/mBio.00031-14 - DOI - PMC - PubMed
1. Jiang WM, Wang SC, Peng C, Yu JM, Zhuang QY, Hou GY, et al. Identification of a potential novel type of influenza virus in Bovine in China. Virus Genes. 2014;49:493–6. 10.1007/s11262-014-1107-3 - DOI - PubMed
1. Collin EA, Sheng Z, Lang Y, Ma W, Hause BM, Li F. Cocirculation of two distinct genetic and antigenic lineages of proposed influenza D virus in cattle. J Virol. 2015;89:1036–42. 10.1128/JVI.02718-14 - DOI - PMC - PubMed

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[1] Hause BM, Ducatez M, Collin EA, Ran Z, Liu R, Sheng Z, et al. Isolation of a novel swine influenza virus from Oklahoma in 2011 which is distantly related to human influenza C viruses. PLoS Pathog. 2013;9:e1003176. 10.1371/journal.ppat.1003176 - DOI - PMC - PubMed

[2] Hause BM, Ducatez M, Collin EA, Ran Z, Liu R, Sheng Z, et al. Isolation of a novel swine influenza virus from Oklahoma in 2011 which is distantly related to human influenza C viruses. PLoS Pathog. 2013;9:e1003176. 10.1371/journal.ppat.1003176 - DOI - PMC - PubMed

[3] Ducatez MF, Pelletier C, Meyer G. Influenza D virus in cattle, France, 2011–2014. Emerg Infect Dis. 2015;21:368–71 . - PMC - PubMed

[4] Ducatez MF, Pelletier C, Meyer G. Influenza D virus in cattle, France, 2011–2014. Emerg Infect Dis. 2015;21:368–71 . - PMC - PubMed

[5] Hause BM, Collin EA, Liu R, Huang B, Sheng Z, Lu W, et al. Characterization of a novel influenza virus in cattle and swine: proposal for a new genus in the Orthomyxoviridae family. MBio. 2014;5:e00031–14. 10.1128/mBio.00031-14 - DOI - PMC - PubMed

[6] Hause BM, Collin EA, Liu R, Huang B, Sheng Z, Lu W, et al. Characterization of a novel influenza virus in cattle and swine: proposal for a new genus in the Orthomyxoviridae family. MBio. 2014;5:e00031–14. 10.1128/mBio.00031-14 - DOI - PMC - PubMed

[7] Jiang WM, Wang SC, Peng C, Yu JM, Zhuang QY, Hou GY, et al. Identification of a potential novel type of influenza virus in Bovine in China. Virus Genes. 2014;49:493–6. 10.1007/s11262-014-1107-3 - DOI - PubMed

[8] Jiang WM, Wang SC, Peng C, Yu JM, Zhuang QY, Hou GY, et al. Identification of a potential novel type of influenza virus in Bovine in China. Virus Genes. 2014;49:493–6. 10.1007/s11262-014-1107-3 - DOI - PubMed

[9] Collin EA, Sheng Z, Lang Y, Ma W, Hause BM, Li F. Cocirculation of two distinct genetic and antigenic lineages of proposed influenza D virus in cattle. J Virol. 2015;89:1036–42. 10.1128/JVI.02718-14 - DOI - PMC - PubMed

[10] Collin EA, Sheng Z, Lang Y, Ma W, Hause BM, Li F. Cocirculation of two distinct genetic and antigenic lineages of proposed influenza D virus in cattle. J Virol. 2015;89:1036–42. 10.1128/JVI.02718-14 - DOI - PMC - PubMed

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Detection of Influenza D Virus among Swine and Cattle, Italy

Detection of Influenza D Virus among Swine and Cattle, Italy

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