Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: syntenic conservation of repetitive genes
- PMID: 26835745
- DOI: 10.1139/gen-2015-0112
Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: syntenic conservation of repetitive genes
Abstract
The genus Astyanax is widely distributed from the southern United States to northern Patagonia, Argentina. While cytogenetic studies have been performed for this genus, little is known about the histone gene families. The aim of this study was to examine the chromosomal relationships among the different species of Astyanax. The chromosomal locations of the 5S rRNA and H3 histone genes were determined in A. abramis, A. asuncionensis, A. altiparanae, A. bockmanni, A. eigenmanniorum, A. mexicanus (all 2n = 50), A. fasciatus (2n = 46), and A. schubarti (2n = 36). All eight species exhibited H3 histone clusters on two chromosome pairs. In six species (A. abramis, A. asuncionensis, A. altiparanae, A. bockmanni, A. eigenmanniorum, and A. fasciatus), syntenic clusters of H3 histone and 5S rDNA were observed on metacentric (m) or submetacentric (sm) chromosomes. In seven species, clusters of 5S rDNA sequences were located on one or two chromosome pairs. In A. mexicanus, 5S rDNA clusters were located on four chromosome pairs. This study demonstrates that H3 histone clusters are conserved on two chromosome pairs in the genus Astyanax, and specific chromosomal features may contribute to the genomic organization of the H3 histone and 5S rRNA genes.
Keywords: ADN répétés; Astyanax schubarti; FISH; Mexican blind cavefish; karyotype evolution; repetitive DNAs; tétra aveugle; évolution caryotypique.
Similar articles
-
Distinct classical and molecular cytogenetics of Astyanax marionae and A. fasciatus (Characiformes: Characidae): a comparative study of the organization of heterochromatin and repetitive genes.J Genet. 2017 Sep;96(4):665-671. doi: 10.1007/s12041-017-0813-8. J Genet. 2017. PMID: 28947715
-
Highly Similar Morphologies Between Chromosomes Bearing U2 snRNA Gene Clusters in the Group Astyanax Baird and Girard, 1854 (Characiformes, Characidae): An Evolutionary Approach in Species with 2n = 36, 46, 48, and 50.Zebrafish. 2016 Dec;13(6):565-570. doi: 10.1089/zeb.2016.1292. Epub 2016 Jun 22. Zebrafish. 2016. PMID: 27332923
-
Chromosome mapping of H1 histone and 5S rRNA gene clusters in three species of Astyanax (Teleostei, Characiformes).Cytogenet Genome Res. 2011;134(1):64-71. doi: 10.1159/000323512. Epub 2011 Jan 19. Cytogenet Genome Res. 2011. PMID: 21252491
-
Chromosomal microstructure diversity in three Astyanax (Characiformes, Characidae) species: comparative analysis of the chromosomal locations of the 18S and 5S rDNAs.Zebrafish. 2015 Feb;12(1):81-90. doi: 10.1089/zeb.2014.1036. Epub 2014 Dec 30. Zebrafish. 2015. PMID: 25549064
-
The karyotypes and evolution of ZZ/ZW sex chromosomes in the genus Characidium (Characiformes, Crenuchidae).Comp Cytogenet. 2018 Oct 2;12(3):421-438. doi: 10.3897/CompCytogen.v12i3.28736. eCollection 2018. Comp Cytogenet. 2018. PMID: 30310546 Free PMC article. Review.
Cited by
-
Evolutionary Dynamics of the Repetitive DNA in the Karyotypes of Pipa carvalhoi and Xenopus tropicalis (Anura, Pipidae).Front Genet. 2020 Jul 21;11:637. doi: 10.3389/fgene.2020.00637. eCollection 2020. Front Genet. 2020. PMID: 32793276 Free PMC article.
-
Chromosomal mapping of repetitive sequences in Hyphessobrycon eques (Characiformes, Characidae): a special case of the spreading of 5S rDNA clusters in a genome.Genetica. 2020 Feb;148(1):25-32. doi: 10.1007/s10709-020-00086-3. Epub 2020 Jan 29. Genetica. 2020. PMID: 31997050
-
Distinct classical and molecular cytogenetics of Astyanax marionae and A. fasciatus (Characiformes: Characidae): a comparative study of the organization of heterochromatin and repetitive genes.J Genet. 2017 Sep;96(4):665-671. doi: 10.1007/s12041-017-0813-8. J Genet. 2017. PMID: 28947715
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Miscellaneous