Nucleolar DNA: the host and the guests
- PMID: 26847178
- DOI: 10.1007/s00418-016-1407-x
Nucleolar DNA: the host and the guests
Abstract
Nucleoli are formed on the basis of ribosomal genes coding for RNAs of ribosomal particles, but also include a great variety of other DNA regions. In this article, we discuss the characteristics of ribosomal DNA: the structure of the rDNA locus, complex organization and functions of the intergenic spacer, multiplicity of gene copies in one cell, selective silencing of genes and whole gene clusters, relation to components of nucleolar ultrastructure, specific problems associated with replication. We also review current data on the role of non-ribosomal DNA in the organization and function of nucleoli. Finally, we discuss probable causes preventing efficient visualization of DNA in nucleoli.
Keywords: DNA staining; NADs; Nucleolus; Replication; Transcription activity; rDNA.
Similar articles
-
Spatial arrangement of intra-nucleolar rDNA chromatin in amplified Xenopus oocyte nucleoli: structural changes precede the onset of rDNA transcription.Int J Dev Biol. 1996 Feb;40(1):263-72. Int J Dev Biol. 1996. PMID: 8735937
-
Stress-Induced Evolution of the Nucleolus: The Role of Ribosomal Intergenic Spacer (rIGS) Transcripts.Biomolecules. 2024 Oct 20;14(10):1333. doi: 10.3390/biom14101333. Biomolecules. 2024. PMID: 39456266 Free PMC article. Review.
-
Loss of nucleolar histone chaperone NPM1 triggers rearrangement of heterochromatin and synergizes with a deficiency in DNA methyltransferase DNMT3A to drive ribosomal DNA transcription.J Biol Chem. 2014 Dec 12;289(50):34601-19. doi: 10.1074/jbc.M114.569244. Epub 2014 Oct 27. J Biol Chem. 2014. PMID: 25349213 Free PMC article.
-
Non-coding RNAs at the Eukaryotic rDNA Locus: RNA-DNA Hybrids and Beyond.J Mol Biol. 2020 Jul 10;432(15):4287-4304. doi: 10.1016/j.jmb.2020.05.011. Epub 2020 May 21. J Mol Biol. 2020. PMID: 32446803 Review.
-
A transfected human ribosomal RNA gene is present in the nucleolus of human cells.Cytogenet Cell Genet. 1994;66(1):58-62. doi: 10.1159/000133665. Cytogenet Cell Genet. 1994. PMID: 8275711
Cited by
-
In focus in Vienna: the cell nucleus.Histochem Cell Biol. 2016 Apr;145(4):341-2. doi: 10.1007/s00418-016-1420-0. Epub 2016 Feb 18. Histochem Cell Biol. 2016. PMID: 26892404 No abstract available.
-
Nucleolar aggresomes mediate release of pericentric heterochromatin and nuclear destruction of genotoxically treated cancer cells.Nucleus. 2017 Mar 4;8(2):205-221. doi: 10.1080/19491034.2017.1279775. Epub 2017 Jan 9. Nucleus. 2017. PMID: 28068183 Free PMC article.
-
Variability of Human rDNA.Cells. 2021 Jan 20;10(2):196. doi: 10.3390/cells10020196. Cells. 2021. PMID: 33498263 Free PMC article. Review.
-
Nucleolar Sequestration: Remodeling Nucleoli Into Amyloid Bodies.Front Genet. 2019 Nov 21;10:1179. doi: 10.3389/fgene.2019.01179. eCollection 2019. Front Genet. 2019. PMID: 31824572 Free PMC article.
-
Viewing Nuclear Architecture through the Eyes of Nocturnal Mammals.Trends Cell Biol. 2020 Apr;30(4):276-289. doi: 10.1016/j.tcb.2019.12.008. Epub 2020 Jan 22. Trends Cell Biol. 2020. PMID: 31980345 Free PMC article. Review.
References
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources