Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
Review
. 2016 Feb;14(1):42-54.
doi: 10.1016/j.gpb.2015.09.006. Epub 2016 Feb 12.

Roles, Functions, and Mechanisms of Long Non-coding RNAs in Cancer

Affiliations
Review

Roles, Functions, and Mechanisms of Long Non-coding RNAs in Cancer

Yiwen Fang et al. Genomics Proteomics Bioinformatics. 2016 Feb.

Abstract

Long non-coding RNAs (lncRNAs) play important roles in cancer. They are involved in chromatin remodeling, as well as transcriptional and post-transcriptional regulation, through a variety of chromatin-based mechanisms and via cross-talk with other RNA species. lncRNAs can function as decoys, scaffolds, and enhancer RNAs. This review summarizes the characteristics of lncRNAs, including their roles, functions, and working mechanisms, describes methods for identifying and annotating lncRNAs, and discusses future opportunities for lncRNA-based therapies using antisense oligonucleotides.

Keywords: Antisense oligonucleotides; Cancer; Chromatin; Transcription regulation; lncRNAs.

PubMed Disclaimer

Figures

Figure 1
Figure 1
Characteristics of lncRNAs
Figure 2
Figure 2
Acting mechanisms of lncRNAs eRNA, enhancer RNA; ceRNA, competing endogenous RNA; NAT, natural antisense transcript; PRC1, polycomb repressive complex 1.
Figure 3
Figure 3
Hypothesized acting mechanism for eRNAs to initiate chromatin interactions eRNA, enhancer RNA; CTCF, CCCTC-binding factor.
Figure 4
Figure 4
Targeting lncRNAs for therapeutic applications NAT, natural antisense transcript; PRC2, polycomb repressive complex 2; ASO, antisense oligonucleotide; eRNA, enhancer RNA.

References

    1. Berretta J., Morillon A. Pervasive transcription constitutes a new level of eukaryotic genome regulation. EMBO Rep. 2009;10:973–982. - PMC - PubMed
    1. Djebali S., Davis C.A., Merkel A., Dobin A., Lassmann T., Mortazavi A. Landscape of transcription in human cells. Nature. 2012;489:101–108. - PMC - PubMed
    1. Hangauer M.J., Vaughn I.W., McManus M.T. Pervasive transcription of the human genome produces thousands of previously unidentified long intergenic noncoding RNAs. PLoS Genet. 2013;9:e1003569. - PMC - PubMed
    1. Bernstein B.E., Birney E., Dunham I., Green E.D., Gunter C., Snyder M. An integrated encyclopedia of DNA elements in the human genome. Nature. 2012;489:57–74. - PMC - PubMed
    1. Bushati N., Cohen S.M. MicroRNA functions. Annu Rev Cell Dev Biol. 2007;23:175–205. - PubMed

Publication types

MeSH terms