Taxonomy of the order Mononegavirales: update 2016

Claudio L Afonso¹, Gaya K Amarasinghe², Krisztián Bányai³, Yīmíng Bào⁴, Christopher F Basler⁵, Sina Bavari⁶, Nicolás Bejerman^{7

8}, Kim R Blasdell⁹, François-Xavier Briand¹⁰, Thomas Briese¹¹, Alexander Bukreyev¹², Charles H Calisher¹³, Kartik Chandran¹⁴, Jiāsēn Chéng¹⁵, Anna N Clawson¹⁶, Peter L Collins¹⁷, Ralf G Dietzgen¹⁸, Olga Dolnik¹⁹, Leslie L Domier²⁰, Ralf Dürrwald²¹, John M Dye⁶, Andrew J Easton²², Hideki Ebihara²³, Szilvia L Farkas³, Juliana Freitas-Astúa²⁴, Pierre Formenty²⁵, Ron A M Fouchier²⁶, Yànpíng Fù¹⁵, Elodie Ghedin²⁷, Michael M Goodin²⁸, Roger Hewson²⁹, Masayuki Horie³⁰, Timothy H Hyndman³¹, Dàohóng Jiāng¹⁵, Elliot W Kitajima³², Gary P Kobinger³³, Hideki Kondo³⁴, Gael Kurath³⁵, Robert A Lamb^{36

37}, Sergio Lenardon⁷, Eric M Leroy³⁸, Ci-Xiu Li³⁹, Xian-Dan Lin⁴⁰, Lìjiāng Liú¹⁵, Ben Longdon⁴¹, Szilvia Marton³, Andrea Maisner¹⁹, Elke Mühlberger⁴², Sergey V Netesov⁴³, Norbert Nowotny^{44

45}, Jean L Patterson⁴⁶, Susan L Payne⁴⁷, Janusz T Paweska⁴⁸, Rick E Randall⁴⁹, Bertus K Rima⁵⁰, Paul Rota⁵¹, Dennis Rubbenstroth⁵², Martin Schwemmle⁵², Mang Shi⁵³, Sophie J Smither⁵⁴, Mark D Stenglein⁵⁵, David M Stone⁵⁶, Ayato Takada⁵⁷, Calogero Terregino⁵⁸, Robert B Tesh¹², Jun-Hua Tian⁵⁹, Keizo Tomonaga⁶⁰, Noël Tordo^{61

62}, Jonathan S Towner⁶³, Nikos Vasilakis^{64

65}, Martin Verbeek⁶⁶, Viktor E Volchkov⁶⁷, Victoria Wahl-Jensen⁶⁸, John A Walsh²², Peter J Walker⁹, David Wang⁶⁹, Lin-Fa Wang^{70

71}, Thierry Wetzel⁷², Anna E Whitfield⁷³, Ji Tāo Xiè¹⁵, Kwok-Yung Yuen⁷⁴, Yong-Zhen Zhang⁵³, Jens H Kuhn⁷⁵

Affiliations

¹ Southeast Poultry Research Laboratory, Agricultural Research Service, US Department of Agriculture, Athens, GA, USA.
² Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO, USA.
³ Institute for Veterinary Medical Research, Centre for Agricultural Research, Hungarian Academy of Sciences, Budapest, Hungary.
⁴ Information Engineering Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.
⁵ Center for Microbial Pathogenesis, Institute for Biomedical Sciences, Georgia State University, Atlanta, GA, USA.
⁶ United States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA.
⁷ Instituto de Patología Vegetal, Centro de Investigaciones Agropecuarias, Instituto Nacional de Tecnología Agropecuaria, Córdoba, Argentina.
⁸ Consejo Nacional de Investigaciones Científicas y Técnicas, Buenos Aires, Argentina.
⁹ CSIRO Health and Biosecurity, Australian Animal Health Laboratory, Geelong, VIC, Australia.
¹⁰ Avian and Rabbit Virology Immunology and Parasitology Unit, French Agency for Food, Environmental and Occupational Health and Safety, Ploufragan, France.
¹¹ Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA.
¹² Departments of Pathology and Microbiology & Immunology, Galveston National Laboratory, The University of Texas Medical Branch, Galveston, TX, USA.
¹³ Arthropod-Borne and Infectious Diseases Laboratory, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, CO, USA.
¹⁴ Department of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY, USA.
¹⁵ State Key Laboratory of Agricultural Microbiology, The Provincial Key Lab of Plant Pathology of Húběi Province, College of Plant Science and Technology, Huázhōng Agricultural University, Wuhan, China.
¹⁶ Integrated Research Facility at Fort Detrick (IRF-Frederick), Division of Clinical Research (DCR), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), B-8200 Research Plaza, Fort Detrick, Frederick, MD, 21702, USA.
¹⁷ Respiratory Viruses Section, Laboratory of Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.
¹⁸ Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, St. Lucia, QLD, Australia.
¹⁹ Institute of Virology, Philipps University Marburg, Marburg, Germany.
²⁰ Department of Crop Sciences, University of Illinois, Champaign, IL, USA.
²¹ IDT Biologika, Dessau-Rosslau, Germany.
²² School of Life Sciences, University of Warwick, Coventry, UK.
²³ Rocky Mountain Laboratories Integrated Research Facility, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.
²⁴ Embrapa Cassava and Fruits, Cruz das Almas, Bahia, Brazil.
²⁵ World Health Organization, Geneva, Switzerland.
²⁶ Department of Viroscience, Postgraduate School Molecular Medicine, Erasmus University Medical Center, Rotterdam, The Netherlands.
²⁷ Department of Biology, Center for Genomics and Systems Biology, New York University, New York, NY, USA.
²⁸ Plant Pathology, University of Kentucky, Lexington, KY, USA.
²⁹ Public Health England, Porton Down, Wiltshire, Salisbury, UK.
³⁰ Joint Faculty of Veterinary Medicine, Transboundary Animal Diseases Research Center, Kagoshima University, Kagoshima, Japan.
³¹ School of Veterinary and Life Sciences, Murdoch University, Murdoch, WA, Australia.
³² Núcleo de Apoio à Pesquisa em Microscopia Eletrônica Aplicada a Agricultura, Escola Superior de Agricultura "Luiz de Queiroz", Universidade de São Paulo, Piracicaba, São Paulo, Brazil.
³³ Special Pathogens Program, National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada.
³⁴ Institute of Plant Science and Resources, Okayama University, Kurashiki, Japan.
³⁵ US Geological Survey Western Fisheries Research Center, Seattle, WA, USA.
³⁶ Department of Molecular Biosciences, Northwestern University, Evanston, IL, USA.
³⁷ Howard Hughes Medical Institute, Northwestern University, Evanston, IL, USA.
³⁸ Centre International de Recherches Médicales de Franceville, Institut de Recherche pour le Développement, Franceville, Gabon.
³⁹ Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Hangzhou, China.
⁴⁰ Wēnzhōu Center for Disease Control and Prevention, Wenzhou, China.
⁴¹ Department of Genetics, University of Cambridge, Cambridge, UK.
⁴² Department of Microbiology and National Emerging Infectious Diseases Laboratory, Boston University School of Medicine, Boston, MA, USA.
⁴³ Novosibirsk State University, Novosibirsk, Novosibirsk Oblast, Russia.
⁴⁴ Institute of Virology, University of Veterinary Medicine, Vienna, Austria.
⁴⁵ Department of Basic Medical Sciences, College of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai, United Arab Emirates.
⁴⁶ Department of Virology and Immunology, Texas Biomedical Research Institute, San Antonio, TX, USA.
⁴⁷ Department of Veterinary Pathobiology, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, TX, USA.
⁴⁸ Center for Emerging and Zoonotic Diseases, National Institute for Communicable Diseases of the National Health Laboratory Service, Sandringham-Johannesburg, Gauteng, South Africa.
⁴⁹ Biomedical Sciences Research Complex, University of St. Andrews, St. Andrews, Scotland, UK.
⁵⁰ Centre for Experimental Medicine, School of Medicine, Dentistry and Biomedical Sciences, The Queen's University of Belfast, Belfast, Northern Ireland, UK.
⁵¹ National Center for Immunization and Respiratory Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
⁵² Institute for Virology, Faculty of Medicine, Medical Center-University of Freiburg, University of Freiburg, Freiburg, Germany.
⁵³ State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
⁵⁴ CBR Division, Dstl, Porton Down, Salisbury, Wiltshire, UK.
⁵⁵ Department of Microbiology, Immunology, and Pathology, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, CO, USA.
⁵⁶ Centre for Environment, Fisheries and Aquaculture Science Weymouth, Dorset, UK.
⁵⁷ Division of Global Epidemiology, Hokkaido University Research Center for Zoonosis Control, Sapporo, Japan.
⁵⁸ Istituto Zooprofilattico Sperimentale delle Venezie, Department of Comparative Biomedical Sciences, National/OIE Reference Laboratory for Newcastle Disease and Avian Influenza, FAO Reference Centre for Animal Influenza and Newcastle Disease, OIE Collaborating Centre for Diseases at the Human-Animal Interface, Legnaro, Padova, Italy.
⁵⁹ Wǔhàn Center for Disease Control and Prevention, Wuhan, China.
⁶⁰ Institute for Virus Research, Kyoto University, Kyoto, Japan.
⁶¹ Institut Pasteur, Unité des Stratégies Antivirales, Paris, France.
⁶² Institut Pasteur de Guinée, Conakry, Guinea.
⁶³ Viral Special Pathogens Branch, Division of High-Consequence Pathogens Pathology, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
⁶⁴ Center for Biodefense and Emerging Infectious Diseases, Department of Pathology, The University of Texas Medical Branch, Galveston, TX, USA.
⁶⁵ Center for Tropical Diseases, Institute for Human Infections and Immunity, The University of Texas Medical Branch, Galveston, TX, USA.
⁶⁶ Wageningen University and Research, Wageningen, The Netherlands.
⁶⁷ Molecular Basis of Viral Pathogenicity, CIRI, INSERM U1111, CNRS UMR5308, Université de Lyon, Université Claude Bernard Lyon 1, Ecole Normale Supérieure de Lyon, Lyon, France.
⁶⁸ National Biodefense Analysis and Countermeasures Center, Fort Detrick, Frederick, MD, USA.
⁶⁹ Departments of Molecular Microbiology and Pathology and Immunology, Washington University School of Medicine, St. Louis, MO, USA.
⁷⁰ Department of Agriculture and Fisheries, Biosecurity Queensland, Brisbane, QLD, Australia.
⁷¹ Program in Emerging Infectious Diseases, Duke-NUS Graduate Medical School, Singapore, Singapore.
⁷² DLR Rheinpfalz, Institute of Plant Protection, Neustadt an der Weinstrasse, Germany.
⁷³ Plant Pathology, Kansas State University, Manhattan, KS, USA.
⁷⁴ State Key Laboratory of Emerging Infectious Diseases, Department of Microbiology, University of Hong Kong, Hong Kong Special Administrative Region, Hong Kong, China.
⁷⁵ Integrated Research Facility at Fort Detrick (IRF-Frederick), Division of Clinical Research (DCR), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), B-8200 Research Plaza, Fort Detrick, Frederick, MD, 21702, USA. kuhnjens@mail.nih.gov.

PMID: 27216929
PMCID: PMC4947412
DOI: 10.1007/s00705-016-2880-1

Taxonomy of the order Mononegavirales: update 2016

Claudio L Afonso et al. Arch Virol. 2016 Aug.

. 2016 Aug;161(8):2351-60.

doi: 10.1007/s00705-016-2880-1. Epub 2016 May 23.

Authors

Affiliations

¹ Southeast Poultry Research Laboratory, Agricultural Research Service, US Department of Agriculture, Athens, GA, USA.
² Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO, USA.
³ Institute for Veterinary Medical Research, Centre for Agricultural Research, Hungarian Academy of Sciences, Budapest, Hungary.
⁴ Information Engineering Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.
⁵ Center for Microbial Pathogenesis, Institute for Biomedical Sciences, Georgia State University, Atlanta, GA, USA.
⁶ United States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA.
⁷ Instituto de Patología Vegetal, Centro de Investigaciones Agropecuarias, Instituto Nacional de Tecnología Agropecuaria, Córdoba, Argentina.
⁸ Consejo Nacional de Investigaciones Científicas y Técnicas, Buenos Aires, Argentina.
⁹ CSIRO Health and Biosecurity, Australian Animal Health Laboratory, Geelong, VIC, Australia.
¹⁰ Avian and Rabbit Virology Immunology and Parasitology Unit, French Agency for Food, Environmental and Occupational Health and Safety, Ploufragan, France.
¹¹ Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA.
¹² Departments of Pathology and Microbiology & Immunology, Galveston National Laboratory, The University of Texas Medical Branch, Galveston, TX, USA.
¹³ Arthropod-Borne and Infectious Diseases Laboratory, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, CO, USA.
¹⁴ Department of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY, USA.
¹⁵ State Key Laboratory of Agricultural Microbiology, The Provincial Key Lab of Plant Pathology of Húběi Province, College of Plant Science and Technology, Huázhōng Agricultural University, Wuhan, China.
¹⁶ Integrated Research Facility at Fort Detrick (IRF-Frederick), Division of Clinical Research (DCR), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), B-8200 Research Plaza, Fort Detrick, Frederick, MD, 21702, USA.
¹⁷ Respiratory Viruses Section, Laboratory of Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.
¹⁸ Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, St. Lucia, QLD, Australia.
¹⁹ Institute of Virology, Philipps University Marburg, Marburg, Germany.
²⁰ Department of Crop Sciences, University of Illinois, Champaign, IL, USA.
²¹ IDT Biologika, Dessau-Rosslau, Germany.
²² School of Life Sciences, University of Warwick, Coventry, UK.
²³ Rocky Mountain Laboratories Integrated Research Facility, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.
²⁴ Embrapa Cassava and Fruits, Cruz das Almas, Bahia, Brazil.
²⁵ World Health Organization, Geneva, Switzerland.
²⁶ Department of Viroscience, Postgraduate School Molecular Medicine, Erasmus University Medical Center, Rotterdam, The Netherlands.
²⁷ Department of Biology, Center for Genomics and Systems Biology, New York University, New York, NY, USA.
²⁸ Plant Pathology, University of Kentucky, Lexington, KY, USA.
²⁹ Public Health England, Porton Down, Wiltshire, Salisbury, UK.
³⁰ Joint Faculty of Veterinary Medicine, Transboundary Animal Diseases Research Center, Kagoshima University, Kagoshima, Japan.
³¹ School of Veterinary and Life Sciences, Murdoch University, Murdoch, WA, Australia.
³² Núcleo de Apoio à Pesquisa em Microscopia Eletrônica Aplicada a Agricultura, Escola Superior de Agricultura "Luiz de Queiroz", Universidade de São Paulo, Piracicaba, São Paulo, Brazil.
³³ Special Pathogens Program, National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada.
³⁴ Institute of Plant Science and Resources, Okayama University, Kurashiki, Japan.
³⁵ US Geological Survey Western Fisheries Research Center, Seattle, WA, USA.
³⁶ Department of Molecular Biosciences, Northwestern University, Evanston, IL, USA.
³⁷ Howard Hughes Medical Institute, Northwestern University, Evanston, IL, USA.
³⁸ Centre International de Recherches Médicales de Franceville, Institut de Recherche pour le Développement, Franceville, Gabon.
³⁹ Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Hangzhou, China.
⁴⁰ Wēnzhōu Center for Disease Control and Prevention, Wenzhou, China.
⁴¹ Department of Genetics, University of Cambridge, Cambridge, UK.
⁴² Department of Microbiology and National Emerging Infectious Diseases Laboratory, Boston University School of Medicine, Boston, MA, USA.
⁴³ Novosibirsk State University, Novosibirsk, Novosibirsk Oblast, Russia.
⁴⁴ Institute of Virology, University of Veterinary Medicine, Vienna, Austria.
⁴⁵ Department of Basic Medical Sciences, College of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai, United Arab Emirates.
⁴⁶ Department of Virology and Immunology, Texas Biomedical Research Institute, San Antonio, TX, USA.
⁴⁷ Department of Veterinary Pathobiology, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, TX, USA.
⁴⁸ Center for Emerging and Zoonotic Diseases, National Institute for Communicable Diseases of the National Health Laboratory Service, Sandringham-Johannesburg, Gauteng, South Africa.
⁴⁹ Biomedical Sciences Research Complex, University of St. Andrews, St. Andrews, Scotland, UK.
⁵⁰ Centre for Experimental Medicine, School of Medicine, Dentistry and Biomedical Sciences, The Queen's University of Belfast, Belfast, Northern Ireland, UK.
⁵¹ National Center for Immunization and Respiratory Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
⁵² Institute for Virology, Faculty of Medicine, Medical Center-University of Freiburg, University of Freiburg, Freiburg, Germany.
⁵³ State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
⁵⁴ CBR Division, Dstl, Porton Down, Salisbury, Wiltshire, UK.
⁵⁵ Department of Microbiology, Immunology, and Pathology, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, CO, USA.
⁵⁶ Centre for Environment, Fisheries and Aquaculture Science Weymouth, Dorset, UK.
⁵⁷ Division of Global Epidemiology, Hokkaido University Research Center for Zoonosis Control, Sapporo, Japan.
⁵⁸ Istituto Zooprofilattico Sperimentale delle Venezie, Department of Comparative Biomedical Sciences, National/OIE Reference Laboratory for Newcastle Disease and Avian Influenza, FAO Reference Centre for Animal Influenza and Newcastle Disease, OIE Collaborating Centre for Diseases at the Human-Animal Interface, Legnaro, Padova, Italy.
⁵⁹ Wǔhàn Center for Disease Control and Prevention, Wuhan, China.
⁶⁰ Institute for Virus Research, Kyoto University, Kyoto, Japan.
⁶¹ Institut Pasteur, Unité des Stratégies Antivirales, Paris, France.
⁶² Institut Pasteur de Guinée, Conakry, Guinea.
⁶³ Viral Special Pathogens Branch, Division of High-Consequence Pathogens Pathology, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
⁶⁴ Center for Biodefense and Emerging Infectious Diseases, Department of Pathology, The University of Texas Medical Branch, Galveston, TX, USA.
⁶⁵ Center for Tropical Diseases, Institute for Human Infections and Immunity, The University of Texas Medical Branch, Galveston, TX, USA.
⁶⁶ Wageningen University and Research, Wageningen, The Netherlands.
⁶⁷ Molecular Basis of Viral Pathogenicity, CIRI, INSERM U1111, CNRS UMR5308, Université de Lyon, Université Claude Bernard Lyon 1, Ecole Normale Supérieure de Lyon, Lyon, France.
⁶⁸ National Biodefense Analysis and Countermeasures Center, Fort Detrick, Frederick, MD, USA.
⁶⁹ Departments of Molecular Microbiology and Pathology and Immunology, Washington University School of Medicine, St. Louis, MO, USA.
⁷⁰ Department of Agriculture and Fisheries, Biosecurity Queensland, Brisbane, QLD, Australia.
⁷¹ Program in Emerging Infectious Diseases, Duke-NUS Graduate Medical School, Singapore, Singapore.
⁷² DLR Rheinpfalz, Institute of Plant Protection, Neustadt an der Weinstrasse, Germany.
⁷³ Plant Pathology, Kansas State University, Manhattan, KS, USA.
⁷⁴ State Key Laboratory of Emerging Infectious Diseases, Department of Microbiology, University of Hong Kong, Hong Kong Special Administrative Region, Hong Kong, China.
⁷⁵ Integrated Research Facility at Fort Detrick (IRF-Frederick), Division of Clinical Research (DCR), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), B-8200 Research Plaza, Fort Detrick, Frederick, MD, 21702, USA. kuhnjens@mail.nih.gov.

PMID: 27216929
PMCID: PMC4947412
DOI: 10.1007/s00705-016-2880-1

Abstract

In 2016, the order Mononegavirales was emended through the addition of two new families (Mymonaviridae and Sunviridae), the elevation of the paramyxoviral subfamily Pneumovirinae to family status (Pneumoviridae), the addition of five free-floating genera (Anphevirus, Arlivirus, Chengtivirus, Crustavirus, and Wastrivirus), and several other changes at the genus and species levels. This article presents the updated taxonomy of the order Mononegavirales as now accepted by the International Committee on Taxonomy of Viruses (ICTV).

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Conflict of interest statement

Conflict of Interest

The authors have no conflicts of interest.

References

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Taxonomy of the order Mononegavirales: update 2016

Affiliations

Taxonomy of the order Mononegavirales: update 2016

Authors

Affiliations

Abstract

Conflict of interest statement

References

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