Draft Genome Sequence of Ustilago trichophora RK089, a Promising Malic Acid Producer
- PMID: 27469969
- PMCID: PMC4966473
- DOI: 10.1128/genomeA.00749-16
Draft Genome Sequence of Ustilago trichophora RK089, a Promising Malic Acid Producer
Abstract
The basidiomycetous smut fungus Ustilago trichophora RK089 produces malate from glycerol. De novo genome sequencing revealed a 20.7-Mbp genome (301 gap-closed contigs, 246 scaffolds). A comparison to the genome of Ustilago maydis 521 revealed all essential genes for malate production from glycerol contributing to metabolic engineering for improving malate production.
Copyright © 2016 Zambanini et al.
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References
-
- Maassen N, Panakova M, Wierckx N, Geiser E, Zimmermann M, Bölker M, Klinner U, Blank LM. 2013. Influence of carbon and nitrogen concentration on itaconic acid production by the smut fungus Ustilago maydis. Eng Life Sci 14:129–134.
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