Figure 1. The Krebs (TCA) cycle and anaplerotic/cataplerotic pathways
After entering the cell, glucose is phosphorylated by HK1 and then most of it is degraded via glycolysis (A) to pyruvate. Pyruvate enters the mitochondria, where it is decarboxylated and oxidized by PDH enzyme complex to acetyl-CoA, the main source of energy for Krebs cycle. After entering the Krebs cycle, acetyl-CoA condensates with oxaloacetate to produce citrate, catalyzed by CS. Citrate either stays in the mitochondria and is converted to isocitrate by ACO, or is exported to the cytoplasm to be used as a precursor for lipid biosynthesis (via conversion by ACLY). Isocitrate is subsequently decarboxylated to α-ketoglutarate by IDH. α-ketoglutarate is then either converted to succinyl-CoA by α-KGDH complex or exits the mitochondria and serves as a precursor for amino acid biosynthesis. Succinyl-CoA is either transformed to succinate in the reaction catalyzed by SUCLG or can be utilized for porphyrin biosynthesis. Succinate is then oxidized to fumarate by SDH, which also represents complex II of the ETC (dotted circle/ellipse). Fumarate is hydrated to malate by FH and, finally, malate is oxidized by MDH to restore oxaloacetate. In the Krebs cycle, hydrogen atoms reduce NAD+ and FAD to NADH + H+ and FADH2 respectively, which feed the ETC to produce ATP. The Krebs cycle as a biosynthetic pathway produces intermediates that leave the cycle (cataplerosis) to be converted primarily to glutamate, GABA, glutamine and aspartate, and also to glucose derivatives and fatty acids. A minor part of glycolytic glucose-6-phosphate is redirected to the pentose phosphate pathway (B) to produce ribose-5-phosphate and NADPH, which will be used to synthetize nucleotides. The triose phosphates can be used for lipids and phospholipids. In normal cells, amino acids follow the physiological turnover of the proteins and little part is used to synthetize the nucleotide bases. After deamination, the remainder of amino acids are used for energy production. When Krebs cycle ketoacids are consumed or removed, they need to be replaced to permit the Krebs cycle sustained function. This process is called anaplerosis and is tightly coupled with cataplerosis (100). The anaplerotic reactions of Krebs cycle include the catabolism of essential amino acids (histidine, isoleucine, leucine, lysine, methionine, phenylalanine, threonine, tryptophan, and valine) as well as odd chain fatty acids. Anaplerotic reactions provide the Krebs cycle with fumarate, oxaloacetate, α-ketoglutarate, malate, and succinyl-CoA. Oxaloacetate is formed via carboxylation of pyruvate by PC, from malate through oxidation by malate dehydrogenase, or by transamination of aspartate. Pyruvate can also be decarboxylated to malate. Glutaminolysis (C) serves as the source of the Krebs cycle intermediate α-ketoglutarate and oxidation of odd chain fatty acids or metabolism of methionine and isoleucine provide succinyl-CoA. Acetyl-CoA can be replenished from β-oxidation of fatty acids (D). Abbreviations: α-KGDH, alpha-ketoglutarate dehydrogenase; ACLY, ATP-citrate lyase; ACO, aconitase; ADP, adnesoine diphosphate; Aldo, aldolase; ATP, adenosine triphosphate; CO2, carbon dioxide; CoA, coenzyme A; CS, citrate synthase; DHAP, dihydroxyacetone phosphate; Eno, enolase; ETC, electron transport chain; FAD, flavin adenine dinucleotide; FADH2, reduced FAD; FH, fumarate hydratase; G3P, glycerol-3-phosphate; GA3PD, glyceraldehyde-3-phosphate dehydrogenase; GABA, gamma-aminobutyric acid; GDP, guanosine diphosphate; GLDH, glutamate dehydrogenase; GTP, guanosine triphosphate; H2O, water; HK, hexokinase; HS-CoA, Coenzyme A; IDH, isocitrate dehydrogenase; LDH, lactate dehydrogenase; MDH, malate dehydrogenase; NAD+, nicotinamide adenine dinucleotide, oxidized; NADH, reduced form of NAD; PC, pyruvate carboxylase; PDH, pyruvate dehydrogenase; PFK, phosphofructokinase; PGI, glucose-6-phosphate isomerase; PGK, phosphoglycerate kinase; PGM, phosphoglycerate mutase; Pi, inorganic phosphate; PK, pyruvate kinase; SDH, succinate dehydrogenase; SUCLG, succinyl-CoA synthetase; TCA, tricarboxylic acid; TPI, triosephosphate isomerase