A self-splicing intron in the small subunit rRNA gene of Pneumocystis carinii
- PMID: 2788266
- PMCID: PMC318115
- DOI: 10.1093/nar/17.13.5349
A self-splicing intron in the small subunit rRNA gene of Pneumocystis carinii
Abstract
The coding region for the Pneumocystis carinii small subunit rRNA (16S-like rRNA) contains 390 extra base pairs in a region that is highly conserved in other eukaryotic rRNA genes. The sequence has all the elements characteristic of group I self-splicing introns and interrupts the phylogenetically conserved helix proximal to the 3' terminus of the 16S-like rRNA. In vitro transcripts containing the putative group I intron were capable of undergoing a "self-splicing" reaction which required the presence of guanine nucleotide.
Similar articles
-
Characterization of the rRNA-encoding genes and transcripts, and a group-I self-splicing intron in Pneumocystis carinii.Gene. 1992 Oct 1;119(2):163-73. doi: 10.1016/0378-1119(92)90268-t. Gene. 1992. PMID: 1398096
-
Variation and in vitro splicing of group I introns in rRNA genes of Pneumocystis carinii.Nucleic Acids Res. 1993 May 25;21(10):2415-21. doi: 10.1093/nar/21.10.2415. Nucleic Acids Res. 1993. PMID: 8506137 Free PMC article.
-
Sequence and variability of the 5.8S and 26S rRNA genes of Pneumocystis carinii.Nucleic Acids Res. 1992 Jul 25;20(14):3763-72. doi: 10.1093/nar/20.14.3763. Nucleic Acids Res. 1992. PMID: 1641341 Free PMC article.
-
Molecular genetics of group I introns: RNA structures and protein factors required for splicing--a review.Gene. 1988 Dec 20;73(2):273-94. doi: 10.1016/0378-1119(88)90493-3. Gene. 1988. PMID: 3072260 Review.
-
Conserved sequences and structures of group I introns: building an active site for RNA catalysis--a review.Gene. 1988 Dec 20;73(2):259-71. doi: 10.1016/0378-1119(88)90492-1. Gene. 1988. PMID: 3072259 Review.
Cited by
-
Accurate Estimation of Fungal Diversity and Abundance through Improved Lineage-Specific Primers Optimized for Illumina Amplicon Sequencing.Appl Environ Microbiol. 2016 Nov 21;82(24):7217-7226. doi: 10.1128/AEM.02576-16. Print 2016 Dec 15. Appl Environ Microbiol. 2016. PMID: 27736792 Free PMC article.
-
DNA sequence analysis of the 24.5 kilobase pair cytochrome oxidase subunit I mitochondrial gene from Podospora anserina: a gene with sixteen introns.Curr Genet. 1989 Dec;16(5-6):381-406. doi: 10.1007/BF00340719. Curr Genet. 1989. PMID: 2558809
-
Comparative study of antipneumocystis agents in rats by using a Pneumocystis carinii-specific DNA probe to quantitate infection.J Clin Microbiol. 1992 Nov;30(11):2968-74. doi: 10.1128/jcm.30.11.2968-2974.1992. J Clin Microbiol. 1992. PMID: 1452667 Free PMC article.
-
Group I intron renders differential susceptibility of Candida albicans to Bleomycin.Mol Biol Rep. 2007 Mar;34(1):11-7. doi: 10.1007/s11033-006-9002-1. Epub 2006 Nov 7. Mol Biol Rep. 2007. PMID: 17115251
-
Pentamidine inhibits mitochondrial intron splicing and translation in Saccharomyces cerevisiae.RNA. 2000 Jul;6(7):937-51. doi: 10.1017/s1355838200991726. RNA. 2000. PMID: 10917591 Free PMC article.
References
Publication types
MeSH terms
Substances
Associated data
- Actions
Grants and funding
LinkOut - more resources
Full Text Sources
Other Literature Sources
Medical
Molecular Biology Databases