Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2016 Nov 28:7:13491.
doi: 10.1038/ncomms13491.

Total synthesis of feglymycin based on a linear/convergent hybrid approach using micro-flow amide bond formation

Affiliations

Total synthesis of feglymycin based on a linear/convergent hybrid approach using micro-flow amide bond formation

Shinichiro Fuse et al. Nat Commun. .

Abstract

Feglymycin is a naturally occurring, anti-HIV and antimicrobial 13-mer peptide that includes highly racemizable 3,5-dihydroxyphenylglycines (Dpgs). Here we describe the total synthesis of feglymycin based on a linear/convergent hybrid approach. Our originally developed micro-flow amide bond formation enabled highly racemizable peptide chain elongation based on a linear approach that was previously considered impossible. Our developed approach will enable the practical preparation of biologically active oligopeptides that contain highly racemizable amino acids, which are attractive drug candidates.

PubMed Disclaimer

Figures

Figure 1
Figure 1. Synthetic strategy for feglymycin (1).
Our linear synthetic approach and Süssmuth's convergent synthetic approaches. Süssmuth concluded that the linear approach for oligopeptides 2 and 3 containing D-Dpgs was not possible.
Figure 2
Figure 2. Micro-flow synthesis of dipeptide 20.
Dipeptide 20 was prepared by micro-flow amide bond formation. The obtained dipeptide was readily purified via simple aqueous workup and recrystallization.
Figure 3
Figure 3. Synthesis of C-terminal hexapeptide 2 using micro-flow amidation.
Conditions: (a) Pd(PPh3)4, PhSiH3, CH2Cl2/MeOH, r.t., 1–1.5 h, batch. (b) PS-Ph3P-Pd, PhSiH3, CH2Cl2/MeOH/H2O, r.t., 1 h, batch.
Figure 4
Figure 4. Synthesis of N-terminal heptapeptide 3 using micro-flow amidation.
Conditions: (a) Pd(PPh3)4, PhSiH3, CH2Cl2/MeOH/H2O, r.t., 40 min, batch. (b) PS-Ph3P-Pd, PhSiH3, CH2Cl2/MeOH/H2O, r.t., 1.5–2.5 h, batch.
Figure 5
Figure 5. Total synthesis of feglymycin (1).
Conditions: (a) Me3SnOH, 1,2-dichloroethane; 85 °C, 3.5 h; (b) PS-Ph3P-Pd, PhSiH3, CH2Cl2/MeOH/H2O, r.t., 50 min; (c) DEPBT, NaHCO3, DMF, 0 °C, 24 h, then 25 °C, 11 h, 2 steps 44% from heptapeptide 3. (d) H2, Pd/C, MeOH, r.t., 3 h, quant.

References

    1. Neefjes J. & Ovaa H. A peptide's perspective on antigen presentation to the immune system. Nat. Chem. Biol. 9, 769–775 (2013). - PubMed
    1. Fosgerau K. & Hoffmann T. Peptide therapeutics: current status and future directions. Drug Discov. Today 20, 122–128 (2015). - PubMed
    1. Craik D. J., Fairlie D. P., Liras S. & Price D. The future of peptide-based drugs. Chem. Biol. Drug Design 81, 136–147 (2013). - PubMed
    1. Al Toma R. S., Brieke C., Cryle M. J. & Süssmuth R. D. Structural aspects of phenylglycines, their biosynthesis and occurrence in peptide natural products. Nat. Prod. Rep. 32, 1207–1235 (2015). - PubMed
    1. Smith G. G. & Sivakua T. Mechanism of the racemization of amino acids. Kinetics of racemization of arylglycines. J. Org. Chem. 48, 627–634 (1983).

Publication types