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. 2017 Feb;14(127):20160966.
doi: 10.1098/rsif.2016.0966.

Fundamental limitations of network reconstruction from temporal data

Affiliations

Fundamental limitations of network reconstruction from temporal data

Marco Tulio Angulo et al. J R Soc Interface. 2017 Feb.

Abstract

Inferring properties of the interaction matrix that characterizes how nodes in a networked system directly interact with each other is a well-known network reconstruction problem. Despite a decade of extensive studies, network reconstruction remains an outstanding challenge. The fundamental limitations governing which properties of the interaction matrix (e.g. adjacency pattern, sign pattern or degree sequence) can be inferred from given temporal data of individual nodes remain unknown. Here, we rigorously derive the necessary conditions to reconstruct any property of the interaction matrix. Counterintuitively, we find that reconstructing any property of the interaction matrix is generically as difficult as reconstructing the interaction matrix itself, requiring equally informative temporal data. Revealing these fundamental limitations sheds light on the design of better network reconstruction algorithms that offer practical improvements over existing methods.

Keywords: network reconstruction; networked systems; system identification.

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Figures

Figure 1.
Figure 1.
Two sources of indistinguishability. (a) The same dynamics can be characterized by two regressors with different coupling functions (purple and green), yielding indistinguishable networks that differ in their edge weights, sign patterns, connectivity patterns and degree sequences. (b) With the classical population dynamics described by the generalized Lotka–Volterra (GLV) model formula image, the two different networks shown in the top panel produce identical node trajectories x(t) (bottom panel). Here, the growth rate vector is formula image and initial abundance formula image. (Online version in colour.)
Figure 2.
Figure 2.
Indistinguishability of interconnection vectors. (a) Indistinguishable vectors due to unknown coupling functions can be transformed into each other using some transformation formula image. Sets of those indistinguishable vectors are the partition of formula image by the orbits formula image of formula image, here shown in different colours for formula image and formula image. Purple regions should be interpreted as points, and blue regions as lines. The grey region is another orbit. We can distinguish an interconnection vector in the blue orbit (e.g. v2 with component formula image) from an interconnection vector in the orange orbit (e.g. v1 or v3 with component formula image), illustrating that we can distinguish the adjacency of the interconnection vector (i.e. whether aij is zero or not for formula image). Nevertheless, as v1 and v3 belong to the same orbit and hence are indistinguishable, but they have different degree sequences and sign or connectivity patterns, these properties cannot be reconstructed. (b) Owing to uninformative measured temporal data, the interconnection vector v1 is indistinguishable from v2 because formula image, i.e. both vectors are joined by the red fibre. We can also separate the sets Py1 and Py2 with the particular orientation of the fibres. However, as there is no gap between these sets, any change in the orientation of the fibres will produce indistinguishable interconnection vectors that belong to different sets. This illustrates that the PE condition remains generically necessary if there is no gap between the sets in formula image. formula image Indistinguishable vectors in network reconstruction appear by combining both kinds of indistinguishable vectors, gluing together orbits of formula image when they are intersected by a fibre of formula image. In the left panel, as formula image is not contained in low-dimensional orbits, all orbits are are glued formula image and all vectors become indistinguishable (e.g. v1 is indistinguishable from v3). In the right panel, formula image is contained in low-dimensional orbits. We can then distinguish between v2 and v3 and hence reconstruct the adjacency pattern of the interaction matrix. (Online version in colour.)

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