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. 2017 Feb 16;5(7):e01604-16.
doi: 10.1128/genomeA.01604-16.

Complete Genome Sequence of Methanohalophilus halophilus DSM 3094T, Isolated from a Cyanobacterial Mat and Bottom Deposits at Hamelin Pool, Shark Bay, Northwestern Australia

Stéphane L'Haridon  1   2   3 , Erwan Corre  4 , Yue Guan  5 , Manikandan Vinu  5 , Violetta La Cono  6 , Mickail Yakimov  6 , Ulrich Stingl  5 , Laurent Toffin  1   2   3 , Mohamed Jebbar  7   2   3
Affiliations

Complete Genome Sequence of Methanohalophilus halophilus DSM 3094T, Isolated from a Cyanobacterial Mat and Bottom Deposits at Hamelin Pool, Shark Bay, Northwestern Australia

Stéphane L'Haridon et al. Genome Announc. .

Abstract

The complete genome sequence of Methanohalophilus halophilus DSM 3094T, a member of the Methanosarcinaceae family and the Methanosarcianales order, consists of 2,022,959 bp in one contig and contains 2,137 predicted genes. The genome is consistent with a halophilic methylotrophic anaerobic lifestyle, including the methylotrophic and CO2-H2 methanogensis pathways.

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References

    1. Zhilina TN. 1983. New obligate halophilic methane-producing bacterium. Microbiology 52:290–297.
    1. Wilharm T, Zhilina TN, Hummel P. 1991. DNA-DNA hybridization of methylotrophic halophilic methanogen bacteria and transfer of Methanococcus halophilus to the genus Methanohalophilus as Methanohaophilus halophilus comb-nov. Int J Syst Bacteriol 41:558–562. doi:10.1099/00207713-41-4-558. - DOI
    1. Nurk S, Bankevich A, Antipov D, Gurevich A, Korobeynikov A, Lapidus A, Prjibelsky A, Pyshkin A, Sirotkin A, Sirotkin Y, Stepanauskas R, McLean J, Lasken R, Clingenpeel SR, Woyke T, Tesler G, Alekseyev MA, Pevzner PA. 2013. Assembling genomes and mini-metagenomes from highly chimeric reads, p 158–170. In Deng M, Jiang R, Sun F, Zhang X (ed), Proceedings of the 17th Annual International Conference, RECOMB 2013, Beijing, China, April 7–10, 2013. Springer Berlin Heidelberg, Berlin, Germany. doi:10.1007/978-3-642-37195-0_13. - DOI
    1. Boetzer M, Henkel CV, Jansen HJ, Butler D, Pirovano W. 2011. Scaffolding pre-assembled contigs using SSPACE. Bioinformatics 27:578–579. doi:10.1093/bioinformatics/btq683. - DOI - PubMed
    1. Vallenet D, Labarre L, Rouy Z, Barbe V, Bocs S, Cruveiller S, Lajus A, Pascal G, Scarpelli C, Médigue C. 2006. MaGe: a microbial genome annotation system supported by synteny results. Nucleic Acids Res 34:53–65. doi:10.1093/nar/gkj406. - DOI - PMC - PubMed

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