. 2017 Feb 23;5(8):e01652-16.

doi: 10.1128/genomeA.01652-16.

Draft Genome Sequences of Dermacoccus nishinomiyaensis Strains UCD-KPL2534 and UCD-KPL2528 Isolated from an Indoor Track Facility

Brian A Klein^{1

2}, Katherine P Lemon^{3

4}, Prasad Gajare¹, Guillaume Jospin⁵, Jonathan A Eisen^{5

6}, David A Coil⁵

Affiliations

¹ Department of Microbiology, The Forsyth Institute, Cambridge, Massachusetts, USA.
² Department of Oral Medicine, Infection and Immunity, Harvard School of Dental Medicine, Boston, Massachusetts, USA.
³ Department of Microbiology, The Forsyth Institute, Cambridge, Massachusetts, USA klemon@forsyth.org.
⁴ Division of Infectious Diseases, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
⁵ University of California Davis Genome Center, Davis, California, USA.
⁶ Department of Evolution and Ecology and Department of Medical Microbiology and Immunology, University of California Davis, Davis, California, USA.

PMID: 28232444
PMCID: PMC5323623
DOI: 10.1128/genomeA.01652-16

Draft Genome Sequences of Dermacoccus nishinomiyaensis Strains UCD-KPL2534 and UCD-KPL2528 Isolated from an Indoor Track Facility

Brian A Klein et al. Genome Announc. 2017.

. 2017 Feb 23;5(8):e01652-16.

doi: 10.1128/genomeA.01652-16.

Authors

Brian A Klein^{1

2}, Katherine P Lemon^{3

4}, Prasad Gajare¹, Guillaume Jospin⁵, Jonathan A Eisen^{5

6}, David A Coil⁵

Affiliations

¹ Department of Microbiology, The Forsyth Institute, Cambridge, Massachusetts, USA.
² Department of Oral Medicine, Infection and Immunity, Harvard School of Dental Medicine, Boston, Massachusetts, USA.
³ Department of Microbiology, The Forsyth Institute, Cambridge, Massachusetts, USA klemon@forsyth.org.
⁴ Division of Infectious Diseases, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
⁵ University of California Davis Genome Center, Davis, California, USA.
⁶ Department of Evolution and Ecology and Department of Medical Microbiology and Immunology, University of California Davis, Davis, California, USA.

PMID: 28232444
PMCID: PMC5323623
DOI: 10.1128/genomeA.01652-16

Abstract

We present here the draft genome sequences of Dermacoccus nishinomiyaensis strains UCD-KPL2534 and UCD-KPL2528, which were isolated at an indoor track facility in Medford, MA, USA (42.409716, -71.115169) from an exit door handle and settle dust, respectively. The genome assemblies contain 3,088,111 bp in 58 contigs and 3,162,381 bp in 100 contigs, respectively.

PubMed Disclaimer

Cited by

Illuminating microflora: shedding light on the potential of blue light to modulate the cutaneous microbiome.
Serrage HJ, O' Neill CA, Uzunbajakava NE. Serrage HJ, et al. Front Cell Infect Microbiol. 2024 Apr 10;14:1307374. doi: 10.3389/fcimb.2024.1307374. eCollection 2024. Front Cell Infect Microbiol. 2024. PMID: 38660491 Free PMC article. Review.
Comparative genomics of Bacteria commonly identified in the built environment.
Merino N, Zhang S, Tomita M, Suzuki H. Merino N, et al. BMC Genomics. 2019 Jan 28;20(1):92. doi: 10.1186/s12864-018-5389-z. BMC Genomics. 2019. PMID: 30691394 Free PMC article.
Draft Genome Sequence of Dermacoccus nishinomiyaensis TSA37, Isolated from Wood Ash.
Williams AN, MacLea KS. Williams AN, et al. Microbiol Resour Announc. 2019 Dec 12;8(50):e01370-19. doi: 10.1128/MRA.01370-19. Microbiol Resour Announc. 2019. PMID: 31831617 Free PMC article.

References

1. Pathom-aree W, Nogi Y, Sutcliffe IC, Ward AC, Horikoshi K, Bull AT, Goodfellow M. 2006. Dermacoccus abyssi sp. nov., a piezotolerant actinomycete isolated from the Mariana Trench. Int J Syst Evol Microbiol 56:1233–1237. doi:10.1099/ijs.0.64133-0. - DOI - PubMed
1. Pathom-aree W, Nogi Y, Ward AC, Horikoshi K, Bull AT, Goodfellow M. 2006. Dermacoccus barathri sp. nov. and Dermacoccus profundi sp. nov., novel actinomycetes isolated from deep-sea mud of the Mariana Trench. Int J Syst Evol Microbiol 56:2303–2307. doi:10.1099/ijs.0.64250-0. - DOI - PubMed
1. Yang S, Sun W, Tang C, Jin L, Zhang F, Li Z. 2013. Phylogenetic diversity of Actinobacteria associated with soft coral Alcyonium gracllimum and stony coral Tubastraea coccinea in the East China Sea. Microb Ecol 66:189–199. doi:10.1007/s00248-013-0205-4. - DOI - PubMed
1. Mahmoud HM, Kalendar AA. 2016. Coral-associated Actinobacteria: diversity, abundance, and biotechnological potentials. Front Microbiol 7:204. doi:10.3389/fmicb.2016.00204. - DOI - PMC - PubMed
1. Khan S, Beattie TK, Knapp CW. 2016. Relationship between antibiotic- and disinfectant-resistance profiles in bacteria harvested from tap water. Chemosphere 152:132–141. doi:10.1016/j.chemosphere.2016.02.086. - DOI - PubMed

Grants and funding

R01 AI101018/AI/NIAID NIH HHS/United States

LinkOut - more resources

Full Text Sources
Other Literature Sources
- scite Smart Citations
Molecular Biology Databases
- NIAID Data Ecosystem - Find datasets on Infectious and Immune-mediated Diseases
- REBASE - The Restriction Enzyme Database

Save citation to file

Email citation

Add to Collections

Add to My Bibliography

Your saved search

Create a file for external citation management software

Your RSS Feed

Draft Genome Sequences of Dermacoccus nishinomiyaensis Strains UCD-KPL2534 and UCD-KPL2528 Isolated from an Indoor Track Facility

Affiliations

Draft Genome Sequences of Dermacoccus nishinomiyaensis Strains UCD-KPL2534 and UCD-KPL2528 Isolated from an Indoor Track Facility

Authors

Affiliations

Abstract

Similar articles

Cited by

References

Grants and funding

LinkOut - more resources

Full Text Sources

Other Literature Sources

Molecular Biology Databases

Abstract

Similar articles

Cited by

References

Related information

Grants and funding

LinkOut - more resources

Full Text Sources

Other Literature Sources

Molecular Biology Databases