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. 2017 Apr 20;5(16):e01388-16.
doi: 10.1128/genomeA.01388-16.

Genome Sequences of Cluster K Mycobacteriophages DrHayes, Urkel, and SamuelLPlaqson

Kirk R Anders  1 , Alex M Murphy  2 , William F Ettinger  2 , Douglas Kempthorne  2 , Charles Kittridge  2 , Alex Kures  2 , Sarah Lundgren  2 , Jacob Masters  2 , Rachel Noyes  2 , Christina Winters  2 , Perry Yazzolino  2 , Kasandra Ziebert  2 , Joseph Haydock  2 , Stephen Hayes  2 , Rebecca A Garlena  2 , Daniel A Russell  2 , Marianne K Poxleitner  2 , Ann-Scott H Ettinger  2
Affiliations

Genome Sequences of Cluster K Mycobacteriophages DrHayes, Urkel, and SamuelLPlaqson

Kirk R Anders et al. Genome Announc. .

Abstract

Mycobacteriophages DrHayes, Urkel, and SamuelLPlaqson were isolated from soil samples in Spokane, WA, using Mycobacterium smegmatis mc2155 grown at room temperature. The three genomes differ by only a few nucleotides, are 60,526 bp long, have 97 predicted protein-coding genes and one tRNA gene, and are members of subcluster K1.

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References

    1. Suttle CA. 2007. Marine viruses—major players in the global ecosystem. Nat Rev Microbiol 5:801–812. doi: 10.1038/nrmicro1750. - DOI - PubMed
    1. Hatfull GF, Jacobs-Sera D, Lawrence JG, Pope WH, Russell DA, Ko CC, Weber RJ, Patel MC, Germane KL, Edgar RH, Hoyte NN, Bowman CA, Tantoco AT, Paladin EC, Myers MS, Smith AL, Grace MS, Pham TT, O’Brien MB, Vogelsberger AM, Hryckowian AJ, Wynalek JL, Donis-Keller H, Bogel MW, Peebles CL, Cresawn SG, Hendrix RW. 2010. Comparative genomic analysis of 60 mycobacteriophage genomes: genome clustering, gene acquisition, and gene size. J Mol Biol 397:119–143. doi: 10.1016/j.jmb.2010.01.011. - DOI - PMC - PubMed
    1. Pope WH, Bowman CA, Russell DA, Jacobs-Sera D, Asai DJ, Cresawn SG, Jacobs WR, Hendrix RW, Lawrence JG, Hatfull GF, Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science, Phage Hunters Integrating Research and Education and Mycobacterial Genetics Course . 2015. Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity. Elife 4:e06416. doi: 10.7554/eLife.06416. - DOI - PMC - PubMed
    1. Jordan TC, Burnett SH, Carson S, Caruso SM, Clase K, DeJong RJ, Dennehy JJ, Denver DR, Dunbar D, Elgin SC, Findley AM, Gissendanner CR, Golebiewska UP, Guild N, Hartzog GA, Grillo WH, Hollowell GP, Hughes LE, Johnson A, King RA, Lewis LO, Li W, Rosenzweig F, Rubin MR, Saha MS, Sandoz J, Shaffer CD, Taylor B, Temple L, Vazquez E, Ware VC, Barker LP, Bradley KW, Jacobs-Sera D, Pope WH, Russell DA, Cresawn SG, Lopatto D, Bailey CP, Hatfull GF. 2014. A broadly implementable research course in phage discovery and genomics for first-year undergraduate students. mBio 5:e01051-13. doi: 10.1128/mBio.01051-13. - DOI - PMC - PubMed
    1. Hatfull GF. 2015. Innovations in undergraduate science education: going viral. J Virol 89:8111–8113. doi: 10.1128/JVI.03003-14. - DOI - PMC - PubMed

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