Next-generation sequencing to monitor the spread of antimicrobial resistance
- PMID: 28738906
- PMCID: PMC5525366
- DOI: 10.1186/s13073-017-0461-x
Next-generation sequencing to monitor the spread of antimicrobial resistance
Abstract
Next-generation sequencing is increasingly being used to monitor current and historic events related to the emergence and spread of antimicrobial resistance. In a recent publication, researchers analyzed the rise of methicillin-resistant Staphylococcus aureus in the 1960s, emphasizing that adaptations conferring antibiotic resistance might pre-date the introduction of novel antibiotic derivatives. Other researchers have evaluated the role of transmission within a healthcare network, using the example of extended-spectrum beta-lactamase-resistant Escherichia coli.Please see related Genome Biology Research article: www.dx.doi.org/10.1186/s13059-017-1252-9 and Genome Medicine Research article: www.dx.doi.org/10.1186/s13073-017-0457-6.
Keywords: Antibiotic resistance; ESBL; Escherichia coli; MRSA; Next-generation sequencing; Staphylococcus aureus.
Conflict of interest statement
Competing interests
The author declares that he has no competing interests.
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Comment on
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Methicillin-resistant Staphylococcus aureus emerged long before the introduction of methicillin into clinical practice.Genome Biol. 2017 Jul 20;18(1):130. doi: 10.1186/s13059-017-1252-9. Genome Biol. 2017. PMID: 28724393 Free PMC article.
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Longitudinal genomic surveillance of multidrug-resistant Escherichia coli carriage in a long-term care facility in the United Kingdom.Genome Med. 2017 Jul 25;9(1):70. doi: 10.1186/s13073-017-0457-6. Genome Med. 2017. PMID: 28738847 Free PMC article.
References
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- Centers for Disease Control and Prevention. Antibiotic Resistance Threats in the United States, 2013. https://www.cdc.gov/drugresistance/threat-report-2013/index.html. Accessed 7/2/2017.
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- Review on antimicrobial resistance. Antimicrobial resistance: tackling a crisis for the health and wealth of nations. O’Neill J editor. UK Government; 2014. https://amr-review.org/sites/default/files/AMR%20Review%20Paper%20-%20Ta.... Accessed 7/2/2017.
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